Rhincodon typus (whale shark): 109911994
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Entry
109911994 CDS
T06055
Symbol
snx18a
Name
(RefSeq) sorting nexin-18a
KO
K17923
sorting nexin-9/18/33
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109911994 (snx18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109911994 (snx18a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109911994 (snx18a)
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109911994 (snx18a)
Macropinocytosis
Sorting nexins
109911994 (snx18a)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109911994 (snx18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
XFP
BAR
Vps5
Motif
Other DBs
NCBI-GeneID:
109911994
NCBI-ProteinID:
XP_020366956
LinkDB
All DBs
Position
1:59353726..59406090
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AA seq
588 aa
AA seq
DB search
MALQARALYDFQSENVGEISVREDEVLTVYSEHDIDGWLEGVNSRGERGLFPASYVQIVR
AASGGGAPGEPPASRYANVPPGPGPGSTFCPPPLIQVPPAAGGGGGPSPGPGPGPGLVQL
AGLQHQASGSGDDDDWDDDWDDNSTVADEPLSSSGGASGFSPELDGSGRYKVSTGARAGG
GPSSGPSKSTATVSRNLNRFSTFVKSGGEAFILGEAAGFVKDGDRICVVSGPHGPEWQED
PYPFSCSIDEPTKQTKFKGIKSYISYRLVPSHTQSPVNRRYKHFDWLYGRLVEKFPVISV
PHIPEKQATGRFEEDFISKRKKGLILWMNHMTSHPVLARCDVFQHFLTCSDEKAWKQGKR
KAEKDDMVGGNFFLTLSTPASPLDLQEVESRVDGFKSFTKRMDESVFQLSHTANEFARKQ
AVGFKKEYQKVGTSFRLLSQAFEMDQQPFSAGLNRAIAFTGDAYDAIGELFAEQPKQDVD
PIVDLLALYQGHLTNFPDIIHVQKGALTKVKESKRHVEEGKMELQQADGVRERCDTISFA
TLAEIHHFHTIRVSDFKTQMQHFLQQQIHFYQKVTQKLEEALQKYDAV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaggctcgggctctgtatgatttccagagtgagaatgtgggtgagatctcg
gtgcgggaggacgaggtgctgaccgtttacagtgagcacgatattgatggctggctggag
ggggtcaacagccggggggagaggggactcttcccggcctcctatgtgcagatcgtgcgg
gcggcgagcggcgggggagcgcccggagaaccccccgcctcccgttacgccaatgtcccg
ccggggccgggacctggcagcaccttctgccctccgcctctcatccaggtaccgccggca
gcaggaggaggaggcggccccagccccgggcccgggcctgggcctggcctggtgcagctg
gccggcctccaacaccaggcgtcgggcagcggcgacgacgacgactgggacgatgactgg
gacgacaactcgacagtggcggacgagccgctgtcgagctcaggaggagcttcgggtttc
tccccggagctggacggctcgggccggtataaagtgagcacgggggcccgggcgggcgga
gggccctcgtcgggcccctcgaagagcacggcgaccgtcagccgcaacctgaaccgcttc
tccaccttcgtcaagtcgggcggcgaggcgttcatcctgggggaggcggcgggcttcgtc
aaggacggggaccggatctgtgtggtgagcgggccgcacggccccgagtggcaggaggac
ccttacccgttcagctgctccatcgacgagcccaccaagcagaccaagttcaagggcatc
aagagctacatctcgtaccgcctggtgcccagtcacacccagagcccggtcaaccgccgc
tacaaacacttcgactggctgtacggccgcctggtggagaagttcccggtcatctcggtg
ccccacatcccggagaaacaggccaccggccgcttcgaggaggacttcatctccaagcgc
aagaagggcctgatcctgtggatgaaccacatgacgagccacccggtgctggcccgctgc
gacgtcttccagcatttcctcacctgcagcgacgagaaggcctggaagcagggcaagcgc
aaggccgagaaggacgacatggtcggcggcaacttcttcctgaccctcagcaccccggcc
agcccgctcgacctgcaggaggtcgagagccgggtcgacggcttcaagagcttcaccaag
aggatggacgagagcgtcttccagctgagccacaccgccaacgagttcgccaggaagcag
gcggtgggcttcaagaaggagtaccagaaagtgggcacctctttccgactgctgagccag
gccttcgagatggaccagcagcccttctcggcgggactcaaccgcgccatcgccttcacc
ggggacgcctacgatgctatcggagaacttttcgcagaacagcccaaacaagacgtagac
ccgatcgtggacttattagcactttaccaggggcacttgaccaatttccccgatatcatc
cacgtccagaaaggtgctctaaccaaagtaaaggagagtaaacggcatgtggaagaaggg
aagatggaattgcagcaggcagatggagtccgcgaacgctgtgacactatttcttttgct
acactggctgagattcaccattttcacactattcgtgtgtcggacttcaagacacaaatg
cagcattttcttcagcagcagatccatttttaccagaaggtgactcagaagttagaggaa
gcattgcagaaatatgatgctgtttaa
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