Rhincodon typus (whale shark): 109912010
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Entry
109912010 CDS
T06055
Symbol
nup205
Name
(RefSeq) nuclear pore complex protein Nup205
KO
K14310
nuclear pore complex protein Nup205
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109912010 (nup205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109912010 (nup205)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109912010 (nup205)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109912010 (nup205)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109912010 (nup205)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
109912010
NCBI-ProteinID:
XP_048463946
LinkDB
All DBs
Position
18:2899816..3001167
Genome browser
AA seq
2009 aa
AA seq
DB search
MAARTMAVNSAASLWGPYKEIWQTVENVIWKRVPEAVHLLDLTLKKHKPDFISLFKNPAK
NVQHREKVKKASIEGIAIQGQQGTRLLPEQLISEAFILSDLFDIGELSAVELLLAGEHQL
PRFPGLTRGLVAILLYWDGKRCIANSLHSLIQSRQGKTWTLELSSELVSMTTRFTDELME
QGLTQKVLCLINQINLNNEFEKLQTARGLGNASHRKGVSDLIKECRQSLADCLFAWACQT
PLNKDDTLFLISHMECVTLEADGTLENVNLALLMALLYCFDISFLEHVTEDREELIHQLP
LLTERQYVTAIHCKLQNSQPWKLTGLQAVIRLAWALALRGISQLPDTTALTEFTEADEMI
ANMAISQNAFLFLTDAVVRAEGLHQDEFYIRRIHSLITDFLTLMPMKVKQLRNRADEDAR
IIHMSLQMGSEPPSTVRRDLEHLMLLIGELYQKDPFRLELALEYWCPSEPVQTTSMTGSF
SGLTRHRPPQRQVVLSKFVRQMGDMLPPSLYLPYLKMLRGLANGPHCAHYCFSLLKVNGS
SHVENIQVVGGNPVSWEHFFHSLMLYHEHLRRDIPSTDTIQYRHMPLRGITQREMDGLIA
FLQLTGTIVKWSENARLALCEHPQWTPIVVMLGLIQCSIPPGLKAEILKTLAAFGKSPEI
AASLWQSLEYTQMLQTVRNPSQRQDTGIEVELNEIESRSEEYPLTRAFCCLISTLVESSF
PTNLGAGLRPPGFDPYLQFLRDSVFLRFPTRAYRRAAEKWEVAEVVLEVFHKLLRDYEPR
PEDFTDQMVELQGELVVAYKSPGYNLMFHLLNDSPMLGLCLCLLEEGVKLLDTYAPFPGK
KHLEKAVEYSLGLLELALQKENQFMDWLRESHSSVIATPLEQLLQGINPRTKKADHVVNI
ARYMSHGNTNPDLAFESAKILCYISRYPNIQVKLVGDFTQDQTVSETLMSGFVDCLDSEG
AEEMIQADTGIVAEKKSTQVRHDTKIHILSLLINSLDLKAPNLALYLLGYELRKPVNATN
LQDPGVLGCPRTCLHSILNILEKGTEGRNGPLAVKESPHLAELCYQVIYQLCAYSDTSGP
TMRYLRTSQDFLFSQLQHLPFTVKGHKISALNQMSWLMKTAGIELRVTSLNRQRSHTQRL
LHLLLDDVPLRSYSVDAEGSLEEETRNVTGFLHFDTTTKVRRKILSILDSVDFGQKSPEE
LHLDFFDRAQIEQVISKCEHSNQQGQTVCNVKLLHRVLVAEVNALQGIAAIGQRPLLMEE
INTILQHVVERNKLRECLNAKRHMLESWRHLVEIILAACPLDLIQEEDRQLVIRDLLHEL
HDKILTEEAAQELMPVVAGAVFTLTAHLSQSVRSEQKQALSTHSHHVTLLDGSTTSVGEV
TAGFASIGDSSLHIILRKLLDFILRTGGGFQRVRAHLYGALLYYLQMSQKPDEPDTLETG
QKTMWERLTAPEDEYTKLQEDNMNIIEGYGASLMEVVCRDACDGHEIGRMLALAVLDRIV
AIDKHQQWLYYLANSGYLKTLTDSLIQDDAILQSMLSPKPPLLKALYLYESKMAFLTRVA
KNHHGALELLTAGIIVRLSQCQVYDHRPETESHSMFCIRDPSGFIPAPVERYHQILLPAL
QLCQVMLTSSMGKHQLAATQVLQFLISHSDPIQAILRCQELTAASLKELALLTGIISKAA
LPGVVSVIEMDGKHGATMEFQGQIGRFQRQCLGLLSRFTGSDRLYEVKKQQDGTRVSGMS
KKDEMELAIQQICANVVQYCQKLLIQSSPGSQYTICLFTPSLAEGTSREASRQDAPLPMV
PYWRLPSLGVVLFLLKQSANDFFSNYEIHRQSVTKYQNLQHLPPDEIKELCQAMVPFGVD
KISAVQRHVLARRRLVQQINHRAELLSLYCFIVENCLFILWRHLEYYFLYFTPPDAHVSL
NIQSGSYRGRRFQDRSGLDASPESRRLVLSQVNQHDIEQLQIDASASFGESLQKKLLDIE
SVYCKVRSRHLFIQALVRRIRGLVRIKRS
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaggaccatggcggtaaattcagctgccagtctgtgggggccgtacaaagag
atctggcagacagtggagaatgtgatctggaagcgtgttccagaagctgttcacctgttg
gacctcacactcaagaagcacaagccagacttcatctctctcttcaagaatccggctaaa
aatgtacagcaccgggagaaggtgaagaaagccagcattgaaggtattgccatccaaggt
cagcaaggaaccaggctgcttccagaacagctgatcagcgaggcttttattttgagtgac
ctcttcgacatcggagaactttctgcagtggagttactgctggcaggtgaacatcagctg
ccccgttttcctggcttgacacgtggcttggtggctatactgctttattgggatggaaag
aggtgcattgcaaattctttgcattccctcatacaatcgcgacaaggcaaaacatggact
ctggagctcagttcagagcttgtttccatgacaacacggtttaccgacgaattgatggag
caggggctgactcagaaggtgttgtgtttgatcaatcaaataaacctcaataatgagttt
gaaaaactgcaaactgcccgtggcttgggcaatgcgtctcatcgcaaaggggtctctgat
ctgatcaaggaatgccgtcagtctctggcggactgccttttcgcgtgggcctgtcagaca
ccattgaacaaagatgacacgttgtttttgatttctcacatggagtgtgtcacactagag
gctgatggtacattggaaaatgtgaacttggctctcctcatggcactgctgtattgcttt
gatatcagctttttggagcacgtcaccgaggatcgagaagaattaattcatcagctacca
ttgttgacagaacgacagtacgtcactgctatccattgcaaactgcagaactcccagcct
tggaaactgacaggcttgcaagctgtgatcagactggcctgggccttggcactgcgaggg
atttcacaattacctgacactacagcactgacagagtttacagaggctgatgagatgatt
gcgaacatggccattagccagaatgccttccttttcctcactgatgctgtggtgagagct
gagggtttacaccaagatgagttctacatccgtaggattcacagtctaatcacagacttc
ttgacgctcatgccaatgaaggttaaacaactgcggaatcgtgcagatgaagatgcccga
attatccatatgagtctgcagatgggcagtgaaccaccttccacagtacgccgtgacctc
gaacacttaatgctgttgattggagagttgtaccagaaggatcctttcaggctagagctt
gctcttgaatattggtgtccttcagaaccagttcagactacaagcatgactggttccttc
tctggtttgacccgccatagaccaccacaacgccaggttgttctgtcgaagtttgtgagg
cagatgggagacatgctacccccctctctgtacttgccctatcttaagatgctacgcgga
ctagccaatgggccacactgtgcacactactgcttcagtctgctcaaagttaatggcagc
agccacgtagaaaatatccaggtagtcggaggcaacccagtatcatgggaacatttcttc
cactcgctgatgctgtaccacgagcacttaagaagagatattccaagcaccgacaccatt
caatacagacacatgcccttgcgaggcataacacagcgtgaaatggatggcctcatcgcc
ttccttcaacttacaggcaccatcgtcaaatggagtgagaatgcccgcctggctttgtgt
gagcatccacagtggacacctattgtggttatgttgggtttgatccaatgtagcattcca
cctggactaaaagctgaaatactgaagacactggcagcatttggcaaatcaccagagatt
gctgcttcactttggcaatcactggaatatacgcagatgttgcagacagtccgaaaccca
agtcagaggcaagacaccggaattgaggtggagttgaatgaaattgaatctcgcagtgaa
gagtatcctctcaccagagcgttttgctgtctaataagtacactggtcgaaagctctttc
cccacaaaccttggagcaggactccgtccaccaggatttgacccatatctccagttcctt
agagactctgtgtttcttcgctttccaaccagagcatacaggagagctgcagaaaaatgg
gaagtggctgaagttgtgcttgaagttttccataagctcttaagagactatgaaccccga
ccagaagatttcacagaccaaatggtggaacttcaaggagagctggtggttgcatacaaa
tctccaggatacaatttgatgtttcatctgctgaatgactccccgatgctgggcctttgt
ctgtgtcttttggaggaaggtgttaagctgctggacacctacgcaccatttcctggtaaa
aagcacttggaaaaagctgtggaatattccctgggccttttggagctggccctgcagaag
gagaatcaattcatggattggctaagagaaagtcattcctccgtcatcgccacacccctt
gaacagctgcttcagggcatcaatccacgcaccaaaaaggctgaccatgtagtcaatatt
gctcgatacatgagccatggaaacaccaatcctgacctggcgtttgaaagtgccaagata
ctttgctacatctcacgctatccaaacatccaggtgaagctagttggagacttcactcag
gaccagactgtcagtgaaactttgatgtctggttttgtggactgcttggacagtgaagga
gctgaagaaatgattcaggctgacactggcattgttgcagagaagaaaagtacccaggtc
agacacgacaccaaaatccatatcttgagtttattgatcaactccttagacttgaaagct
cccaacctggcattgtatttactgggttatgaactgcgaaagccagtgaatgccaccaat
ctgcaagatccaggtgttcttggttgtccacgaacctgccttcactccattttaaatatt
cttgagaagggcactgaaggaaggaatggacctcttgcagtcaaggaatctccacactta
gctgagctttgctatcaggtgatctatcagttgtgtgcatattcagatacctctggacca
actatgcgatacttgagaacaagccaagattttcttttctcccagctgcagcatcttccc
tttacagttaaaggccataaaatttcagccttgaaccagatgtcatggttgatgaagact
gctgggatcgaactgcgtgtgacatctttgaatcgacagcgttctcacacgcagcgcctc
ctccatctgctgcttgatgatgtaccactgcgatcttactctgttgatgcagaggggagc
ctggaagaagaaacaagaaacgtaactgggtttctgcattttgacaccaccaccaaagtg
cgtcgaaagattctcagtattctagattcagttgacttcggccagaagtctccagaagag
cttcatctggatttttttgatcgtgcccagattgaacaagtcatctctaaatgtgaacat
agcaaccaacaaggccagaccgtctgcaatgtgaagctccttcacagagtgcttgttgct
gaagtgaatgccctccaaggaatagcagccattggacaaagacctttactaatggaggag
ataaacacgatcttgcagcatgtggtggagagaaacaagctgcgggagtgtctcaatgcc
aagcggcacatgttggagtcctggcgccacctggttgagatcattcttgcagcgtgtcca
ctggacttgattcaggaagaggacagacagctggtcattcgagaccttctgcatgagctt
catgacaagatcctcacagaggaggctgcccaggagctcatgcctgtggtggctggggca
gtattcactctcactgcacacctcagccagtcagtccgcagtgagcagaaacaggcgctc
agcacccactcccatcatgtcaccctcctcgatggcagcactacatcagttggggaggta
acggctggctttgcctctattggagactcttctcttcatatcatcctcaggaagctcttg
gatttcattctccgaactggtgggggtttccagcgtgtaagagcacacctctatggagca
cttctgtattatctgcagatgagtcagaaaccggatgaaccggacacattagaaacaggt
cagaaaaccatgtgggagaggctaacggctccagaggatgagtacactaaacttcaagaa
gacaacatgaacatcatagagggttatggggcatcgctgatggaggttgtttgtcgagat
gcttgtgacggccatgaaattgggcgaatgctggcgctggccgtgttggatcggattgtg
gctattgacaaacatcaacagtggctctactaccttgccaacagtggctatctcaaaact
ctaacagatagtctgatccaagatgacgccatccttcagagcatgcttagtcccaaacct
ccattactgaaagccttatacctttatgaatccaaaatggccttcttgacgagagtggct
aagaaccatcatggagccttggagcttctgacagcaggcattattgtgcgcttgtcccag
tgccaggtctatgatcaccggcctgaaactgagtcgcacagtatgttttgtataagagac
ccatcaggatttatcccagcccctgtggagcggtatcatcagattctgctcccagctctt
caactttgccaggtgatgttgacctccagcatggggaaacaccagttggctgcaacacag
gtactgcagtttctaatttcccattcagaccccatccaggctattctacgctgccaggag
ttaactgcagcatccctgaaggagttagcacttttgacaggcattataagcaaggcagcc
ttaccaggtgtggtaagtgtgatagaaatggatggtaaacatggggcaaccatggaattt
caaggtcaaattggacgtttccagcgtcagtgcctgggcttgctcagccgattcactgga
tctgaccgactttatgaggtaaagaagcaacaggatggcactcgggtcagcggaatgagc
aagaaggatgagatggagctagctatacaacagatttgtgcaaatgtggtgcaatactgt
cagaagctgctgatacagagcagtcctggatcccagtacactatctgcctttttactccc
agtcttgctgaaggcacatctcgagaagcaagtaggcaagatgctccattgccaatggta
ccttactggaggctgcccagccttggagtcgttctgttcctgttgaagcaaagtgcaaac
gatttcttcagcaactacgagatccaccggcagagtgtgaccaagtaccagaatctgcag
catctacccccagatgaaatcaaggagctgtgtcaagcaatggtaccctttggagtagac
aagatttcagctgttcaacggcatgttctggcaagacgtaggcttgtgcagcagatcaat
caccgggctgagctgctgtccctctattgcttcattgtggaaaattgtctctttatcttg
tggcgacatctagagtattacttcctgtattttacaccacctgatgcccatgtttccctg
aatatccagagtggatcttacagaggcaggcgatttcaagatcgcagtggtcttgatgca
agtcctgaatccaggcgccttgttctaagtcaagtaaaccaacatgatattgagcagctt
cagattgatgcatcggcaagttttggggagtctctgcagaagaagctgcttgacattgag
agtgtttactgcaaagttcggtcacgacacttgtttattcaggcactggttcgacgaatc
cgtggccttgtgaggataaagaggtcctga
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integrated database retrieval system
