Rhincodon typus (whale shark): 109912029
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Entry
109912029 CDS
T06055
Symbol
pop4
Name
(RefSeq) ribonuclease P protein subunit p29 isoform X1
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109912029 (pop4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109912029 (pop4)
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109912029 (pop4)
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109912029 (pop4)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
109912029 (pop4)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
109912029 (pop4)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
109912029 (pop4)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
109912029 (pop4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
WHD_2nd_SelB_bact
RRT14
Motif
Other DBs
NCBI-GeneID:
109912029
NCBI-ProteinID:
XP_020366996
LinkDB
All DBs
Position
15:complement(32742400..32758408)
Genome browser
AA seq
235 aa
AA seq
DB search
MEKLEFRGGRRGLEKVLDIIYSAISAKGTTHLDIQPQGSKQAEAFVNAFLKNNLPRLGAE
QIQTHLNRKAVILKHILKKRKKEKRKKAKCLSAKERRELRIFELKPEEQRYELFLPLHEL
WKQYIRDLCNGLKSDTQTQMIQTKLLKADFHGAIVTVVKSKCPSYVGATGIILQEMKHIF
KIITKENKLKVIPKQNSIFSVEIDGFVSYIYGSKFQLRSSERSAKKFKGKGSIDL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttggagtttcgggggggacgcagggggctggagaaagttctggatatcatt
tacagtgcgatttctgcgaaaggaacgactcacttggacattcagccccagggatccaaa
caggctgaagcatttgtaaatgcttttctcaagaataatttgccacggttgggtgctgag
cagattcagacacatttaaacagaaaagctgttattcttaagcatatcttaaagaagcgt
aagaaagagaagaggaagaaagcaaagtgtctatctgccaaagagaggcgggagttgaga
atatttgaacttaaaccagaagaacaaagatatgaattgtttctccctttgcatgagtta
tggaagcaatacattcgtgacttatgtaatggcttgaaatctgatacgcagacacagatg
atccagaccaaattgctcaaggcagattttcatggagccattgtgacagtggtgaaatcc
aaatgtccctcctatgtaggggctacaggtattattttgcaggaaatgaagcatatattc
aagattatcaccaaggaaaataagcttaaagttattcccaagcaaaatagtatcttcagt
gttgaaatcgacggctttgtttcctatatctatggaagcaagtttcagctgagatcaagt
gaacgttctgccaaaaagtttaaaggaaaaggaagtatagacctttaa
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