Rhincodon typus (whale shark): 109912045
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Entry
109912045 CDS
T06055
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X2
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04371
Apelin signaling pathway
rtp04910
Insulin signaling pathway
rtp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109912045 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
109912045 (ppargc1a)
04920 Adipocytokine signaling pathway
109912045 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109912045 (ppargc1a)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
109912045 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109912045
NCBI-ProteinID:
XP_020367013
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All DBs
Position
1:95147894..95284324
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AA seq
818 aa
AA seq
DB search
MEWDRCNQDFEWTETEYAALVGEDQPLCSDLPELDLSELDVNDLDTETFLGGLKWYSDQS
GIISNQYGNESSDLFEKMDEENEANLLAALTETLDSIPIDEDGLPSFDALTDGDVTNVND
PGPPSTPDGTPPNPEAEEPSLLKKLLLAPANSQLIYNERNGGSTHTHVTNNNRIRPSPAV
VKVESTSSIRTRNIWQQQKLQVERRPCTELLKYLTASDYSPQSKINDNKISNRAKSISKR
KIQLQSQQSHNLQTRPMTLSLPLTPESSNDPKGSPFETKTIERTLSVQLPGTAGLTPPTT
PPHKANQDNPFKTVVKCRISCNSSVHSPPPKKSRLNDSASNSQLSSPIKKGPEQTELYAQ
LSKTSALCSALSITKNEERKMQRSNARLFGDHDYCQFINAKAELLNNRVFCKEREPKSSK
LQNHPERELLSGQHKQNFLSANDKQENKMENQQQDTQPINYSNTRIQLKDQEIRAELNKH
FGHPSQAFFDEIEDKANHQREKDFCHEYYSKLPTYLNAGMSLDGVFDDSDDETEKFLYPW
DGTPDGLLLERSCSRSLSSSPCSDSVYSPKTYAPSQGIVRTRSRSNSYPRRRACSRSPYS
HSRSRSPYHKSSSRSHHCFDSGSVRVQHRSHGSPCSYSRSRSRSPYSRFSRPRYDSYEEY
ESERMKREEYRRDYEKREFERAKQRERQRQKAIEERRVIYVGKVRGDITRTELKRRFEVF
GEIEECTVHLREVGDNYAFITYRYTCDAFAALENGHTLRRSNEPPFELCFGGGRQFYMSN
YADLDPNSDDFDPASTKSKYDSMDFDTLLKEAQRSLRR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggacaggtgcaaccaagactttgagtggactgaaacagagtatgctgcatta
gttggtgaagaccagccactgtgttcagatctccctgaacttgacctttctgagcttgat
gtaaatgatttggacacagaaacttttctgggtggactcaagtggtacagtgaccaatct
ggaataatttccaaccaatatgggaatgaatcctctgacctcttcgagaagatggatgaa
gaaaatgaggctaacttgttggctgccttaacggagacattggacagcatcccaatagat
gaggatggactgccttcatttgatgcactgacagatggggatgtgaccaatgtcaatgat
cccggccctccctcaacgcctgacggcacccctccgaatccggaggctgaagagccgtct
ctattaaagaagctcttgctagctcctgccaattcacagcttatctacaatgaacgcaat
ggaggcagcacccacacccacgtgaccaacaataacaggattagaccaagcccggctgtt
gtcaaggtggagtcaacgtcaagtatcaggacaagaaatatttggcagcagcagaagtta
caggttgagcgccgtccatgcactgaattgctcaaatacctgactgccagtgattattct
cctcagtccaaaataaatgacaacaaaattagcaatagagccaaaagcatctccaaaagg
aagatacagctgcaatcacagcaatcacataacctacaaactcgaccaatgactctgtcc
ctgcctttgacaccagaatcatcaaatgatcctaaaggttccccatttgagaccaagact
attgaacgtaccctgagtgtccaactccctggtactgctggtctaacaccaccaacgact
cctccgcataaagctaaccaagataatccatttaagactgtggtcaaatgcaggatatct
tgtaattcttcagtgcatagtccaccaccaaagaaatcacgcttaaatgattctgcctct
aactctcaactgagcagtcctattaagaagggccctgaacagactgaactatatgcccag
ctgagtaagacttcagctttatgcagtgcacttagtattaccaaaaacgaagaaagaaag
atgcaacgatcaaacgcaaggctttttggtgaccatgactactgtcagttcataaatgca
aaggcagaattattaaataacagagtgttctgcaaggaacgagaacctaaaagtagtaaa
ctccaaaatcaccctgaaagagaactcttgtcagggcagcacaaacaaaactttctttct
gctaatgataaacaagaaaataagatggaaaatcagcaacaggatacacagcctatcaac
tactctaataccaggatacaactgaaagaccaagaaattcgagcggaactaaacaagcac
tttgggcatcccagtcaagccttttttgatgaaatagaagataaagcaaatcatcaaaga
gaaaaagacttttgtcatgaatattattcaaaattgcctacctatctaaatgcaggaatg
tctcttgatggtgtatttgatgatagtgatgatgagactgaaaaatttctctacccgtgg
gatggaacacctgatgggttattgttagaaagatcttgttctcgatctctgtccagttct
ccctgcagtgattctgtttactcaccaaagacttatgcaccttctcaaggaatagtcagg
acaaggtctagatctaattcctaccccagacgtagagcttgttctcgctccccatattct
cattccagatcaagatcaccataccataaatcctcttccagatcacatcactgctttgat
tcagggagcgttagagtacaacacagatctcatggaagtccctgctcatattcaaggtca
cgctccaggtcaccttacagccgctttagtagacccaggtatgacagctatgaggaatat
gaaagtgaaaggatgaaaagggaagaatatcgaagagactatgagaaacgtgaatttgaa
agagcaaagcaaagggagcgacaaaggcaaaaggcaattgaagaacgtcgtgttatttat
gtaggaaaagtcagaggtgatataacccgtaccgaactgaagagacgctttgaagttttt
ggtgaaattgaagaatgcactgtccatttgcgtgaagttggtgacaactatgctttcatc
acatatcgttacacctgtgatgcattcgctgcccttgagaatggacacactttgcgaaga
tccaatgagcccccttttgaattgtgcttcggtggcggcagacaattctacatgtctaac
tatgcagatctagaccccaattcagatgactttgaccctgcttcaactaaaagcaagtat
gattcaatggattttgacaccttgctgaaagaagcccagcgaagcctgcgtaggtaa
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