Rhincodon typus (whale shark): 109912134
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Entry
109912134 CDS
T06055
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109912134 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109912134 (hdac4)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109912134 (hdac4)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
109912134 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
109912134
NCBI-ProteinID:
XP_048454595
LinkDB
All DBs
Position
7:complement(18343235..18804334)
Genome browser
AA seq
1087 aa
AA seq
DB search
MMTSQSHSDGLSGRDQSIELLTPSRVNHMPSTVDISTALPPQVQPSTPMDLRLDHQFPVP
AADPNVQEQQLQQELIALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHIKHQQDLLA
LKHQQEILEQQRKLEQHRQEQEMEKQHREQKLMLLKNKEKGKESAVASTEVKLRLQEFVL
NKKKAAAHRAINHSIPNDPRFWYGKTQHGSLDQSSPPQSSISASYNHPMLGMYDPKDDFP
LRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGSAITTLKKRPMDVPDSACNSAPGSGP
SSPNNSSNNITTENGITGSATNMPTESTMPHKLVTRDGSVTQLPLYTSPSLPNITLGLPA
TGPSSGASGQAEGERVGIQGLPLNTPFIAGTHLPHYITTLDKDGSSGHTPLLQHMVLLDQ
STPQSPLITGLGALPIHPQSLVGPDRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQQLVI
QQQHQQFLEKHKQQFQQQQIHINKLMPKPSEQPRQHESHPEETEEELREHQAMPEEPYSD
RNVNQNESTAMNKVVQVKQEPIESDEEEEEQREQLEQRKRQAEQQQELLFRQQALLLEQQ
RIHQLRNYQASMEAAGIPISYSGHRPLSRAQSSPASATFPISVQEPPSKPQFTTGLVYDT
LMLKHHCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKASLEELQVVHSEQHA
LLYGTNPLNRQKLDSKKLLGSVTPMFVMLPCGGLGVDSDTIWNEIHSSSAARLAVGCVIE
LVFKVATKELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIATKLLQQRLNVSKILIVDWD
VHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNLNMAWTGGLDP
PMGDAEYLTAFRTVVMPIANEFAPDMVLVSSGFDAVEGHPAPLGGYKVSAKCFGYLTKQL
MGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELEPFTQEVLQQRPNPNAVRSIENV
IEIQSKYWKSLQRFSSTVGYSLIEAQRCDKEEADTVTAMASLSMGVKQGSNTEKRPDDEP
MEEEPPM
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgatgacctctcaaagccattcagatggactttctggtcgagatcagtcgattgagttg
ctgaccccttcaagagtgaatcacatgcccagtactgttgatataagcacagcattgcct
ccacaagtccagcccagtacaccaatggatcttcgccttgatcatcagtttccagtgcca
gctgctgaccccaatgtacaagaacaacaactacaacaagaactcattgctctgaaacaa
aaacagcaaatccaacgtcaacttctaatagcagaatttcagagacaacatgagcagctc
tcacgacaacatgaagcccaactgcaagaacatataaagcaccagcaggacttgcttgca
ctgaagcaccaacaagaaattttggaacaacagcgtaaactggaacagcatcgtcaagag
caggagatggagaaacaacacagagaacagaaactaatgctgctaaagaataaagagaaa
ggaaaagaaagtgcagtagcaagtacagaagtgaaattaagacttcaggagtttgtcctg
aataaaaagaaagctgcagcacacagggcgataaatcattccattccaaatgacccaaga
ttttggtacggaaaaacgcagcatggctcattagaccagagttcgccacctcaaagcagc
atatctgcctcatacaatcatccaatgctagggatgtacgatcccaaagatgacttcccg
ctcagaaaaacagcgtcagagccaaacttaaaggtacgctccagattaaaacagaaagtg
gcagagagaagaagtagccctttacttcgaagaaaggatggcagcgccataaccacactt
aaaaagagacccatggatgttccagattcagcttgtaacagtgctcctggatctggccca
agctcccccaacaacagctccaacaacatcactacagaaaatgggattacaggatcagca
accaacatgccaacggagtctacaatgcctcacaaactcgttactcgagatggctcagtg
acacaattgcctctgtatacttcgccatctttgcccaacataactctaggtctgccagcc
acaggtccctctagtggagcctctgggcaagcagaaggtgaaagagtgggcatacaagga
ctcccattgaacactccatttattgctggtactcacctaccacattacatcaccactttg
gataaagatggcagtagtgggcacacacctctcttgcaacatatggtcttactggaccaa
tctacaccacaaagtccactcataactggattgggagcattacccattcacccccaatcg
ctcgttggcccagacagagtttcgccttccatacacaagcttagacagcaccgtccgtta
gggaggacgcagtcagcaccgctgccacagaatgcacaggccttacaacagctggtcata
cagcagcagcatcagcagttcctggagaaacacaaacagcagttccagcaacaacagatt
cacattaacaagttgatgccaaagcctagcgagcagccaaggcaacatgaaagtcaccct
gaagaaacagaagaggagctccgagaacatcaggccatgccagaagaaccatactctgac
agaaatgtcaatcagaatgagtctacagctatgaacaaggtggtacaggtaaaacaagag
ccaattgaaagtgatgaggaagaggaagagcaacgagagcagctggagcaaagaaagagg
caggcagagcaacagcaggaactactcttcagacagcaagcgcttctcctggaacagcaa
cgtattcatcagcttcgcaattatcaagcatccatggaagctgcagggatcccaatatca
tacagcgggcaccgtccactctcccgagcgcaatcatcacctgcttctgctacctttcct
atctctgttcaagaaccacccagtaaacctcagttcactacaggtcttgtatatgataca
ctgatgctaaaacatcactgtacctgtggaaatacaaacagccatccagaacatgcgggc
agaatccagagtatctggtcccgactccaagagacaggcctacgcagcaaatgtgagtgt
attagaggaaggaaagcatctctggaggagctacaggtcgtccattcggagcagcatgca
ttactttatggcacaaacccactgaacagacagaagcttgatagtaagaaactgctaggt
tccgtcactccaatgtttgttatgcttccttgtggcggtcttggagttgacagtgataca
atttggaatgagatccactcatccagtgctgcacgcttagcagtgggctgtgtaattgaa
cttgttttcaaagtggcaactaaggaattaaagaatggatttgcagttgtaaggcctcct
ggacaccatgcagaggagagcacaccaatgggattctgctacttcaattctgtggccatt
gctactaaactcctacagcagaggttgaatgtcagcaaaatccttatagtggactgggat
gtgcatcatggcaatggaacacaacaggctttctacagtgaccccaacgtgttgtacatt
tcattgcatcgctacgatgatggcaacttcttccctggcagtggagccccagatgaggtt
gggaccggtgcaggagtcggatttaacctcaacatggcctggactggaggtctggatcca
ccaatgggagatgctgaatatttgactgcatttaggacagtagtgatgcccattgctaat
gagtttgcccctgatatggtgcttgtgtcttctggattcgatgcagtagaaggacaccct
gcccctcttggaggttacaaagtctctgctaagtgttttggctaccttaccaaacagctg
atgggcctggctggaggccgtgtcgtgctagccctggaagggggccatgatctcactgcc
atttgtgatgcctcagaagcatgtgtttctgctttacttggaaatgagctggagccattc
acacaagaagtgttgcagcaaagaccaaatcccaatgctgttcgttccattgaaaatgta
attgaaatacaaagtaaatactggaagtcgttacagcgcttttcctcaactgtgggctat
tcgctgatagaggcccagaggtgtgataaggaagaagctgacacggtgacagctatggct
tcattgtcaatgggggttaaacaaggatctaatactgagaagaggccagatgacgaaccc
atggaggaagagccacctatgtag
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