Rhincodon typus (whale shark): 109912207
Help
Entry
109912207 CDS
T06055
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109912207
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109912207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2HE
zf-met
zf-C2H2_jaz
TcdA_TcdB
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
109912207
NCBI-ProteinID:
XP_020367181
LinkDB
All DBs
Position
27:15175286..15226627
Genome browser
AA seq
763 aa
AA seq
DB search
MKAEISDMSQWTEVDLEEKCTYIVNDQPADPAKYAEIPLARASIPRNLTFKYTATNEVIG
VISREYIPQGTRFGPLVGDIYTKDNVPKNINRKYFWRVYSSGSLSHFLDGYNVCKSNWMR
YVNPAQSAEEQNLVACQNGTDIYFYTVKPIPPSNELLVWYSREFAERLNYPPTRDLVMLK
LKHNLKGYKDLVSEFTGQLPQNREDIQEGQKQYANDTKNEEEKVDVEIIDRDTPPITPDD
EIADFSKKFYPGVETRHLPEENSSKINDVNDKERSLERTSPLYRTSPNQRSKSPVVEQSP
QILSLNSTTSSQKELPLHLNGCHSHAEGLVSYPMYSPPSHVQQQYMYPYSTLSPHYPRLI
LPNYSPAFNSFHTLNSPGTLNNVNNLSLFGRMAPVCGSFVNGDYLPHPMMSQPVLPVTLS
NEEGQRLHVPEQPRRLLIPAPTSAFSPTGPAMDLKESPHDHSPPSGTSITSELSMPLKTT
SWIPASEEAINLSKPKISLADSPGYKSLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHL
RVHSGERPFSCHTCNKTFTQLAHLQKHYLVHTGEKPHQCQVCHKRFSSTSNLKTHLRLHS
GEKPYQCKQCSAKFTQFVHLKLHRRLHNKERQHRCHFCSKSYIHQCSLKIHLKGNCSMAS
VSSLSKEELLRIDNVIDNFDMSERAERLDESATATEVEVVTEQLLAAGLEKGYKEDPFKA
TCHKSNGDNLPSIGFHERTKNLMLFHHSSPPRLPVRVKQEASL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgagatctcagatatgagccagtggacagaggtggatttggaagagaagtgc
acctacattgtaaatgaccaaccggcggacccagcaaaatatgctgagatccctctggcc
agagcttccataccccgaaaccttaccttcaagtacacagctaccaatgaggtgattgga
gtcattagcagggaatacatcccccaagggacacgttttgggccattggtcggggatatt
tacaccaaagacaatgtcccaaagaacataaaccgaaaatatttctggagggtgtattcc
tccgggagtctcagtcattttctggacgggtataatgtgtgtaaaagtaattggatgcgg
tacgtaaatcccgcacaatcggctgaagagcagaatttagtcgcctgtcagaatggcacc
gatatttacttctacaccgtgaagccaatccctcccagcaatgagctgctggtctggtac
agccgggagtttgctgagagattgaattatcctccgacccgggacctggtgatgctaaaa
ctcaaacataatctcaagggatacaaggatctggtgtctgaattcactggccagctacct
cagaaccgagaagacatacaagaaggccaaaaacagtatgctaacgacacaaagaatgag
gaagaaaaggtggatgtggagataattgacagagatacgccacccatcactcctgatgac
gaaattgcggatttcagtaaaaagttttatccaggtgtagagaccagacatctaccagaa
gaaaatagctcaaagataaatgatgttaatgacaaggaaaggtcattggagagaaccagc
cctttatacagaaccagtccaaaccaaagatcaaaaagtcctgttgttgaacaaagccct
cagattttgtctctcaattcaactacctcatctcagaaagaactccctctacatttgaat
ggatgtcacagtcatgccgagggcctggtctcttacccaatgtactcacctccaagtcat
gtccagcaacagtatatgtatccatatagcacgctgtctcctcactaccctcgattaata
ttgcccaactattcacctgctttcaacagttttcacacgctgaacagtccaggcactttg
aacaatgtgaacaatcttagcctgtttggcaggatggccccagtctgtggcagttttgtg
aatggagactatctgcctcatcccatgatgagccagcctgttctgccggtcacactgtct
aatgaagaaggccaaaggcttcatgtccctgagcagccaaggcgcctccttatccctgcc
ccgaccagtgctttctcacccacaggtccagcaatggacctgaaggaaagtcctcatgac
cattcaccaccatccggtacctcaataacctctgagctgtcgatgccactaaaaactacc
tcctggattccagcaagcgaggaagcgataaatctgagcaaaccaaagatttctctggca
gattcccctggttataaatcacttccatacccactgaagaaacagaatgggaagatcaag
tatgagtgcaacgtgtgttcaaagaccttcggtcagctatcgaacctaaaagtccacctg
agggtccacagtggagagagacctttctcatgccacacgtgcaataagacatttacacaa
cttgctcatctccagaagcattatctggtgcacaccggagaaaagcctcatcagtgccag
gtgtgtcacaaacgtttcagtagcaccagtaacttgaagactcacctccgtctccactct
ggggaaaagccctatcagtgcaagcagtgttcggcaaaattcacccagtttgttcacctc
aagctgcacagacgcctgcacaacaaggaacggcaacacaggtgtcacttctgctccaag
agctacatccaccagtgcagcctgaaaatccacctgaaaggcaattgctctatggcctcg
gtgagcagcttgtccaaggaggaactcctcaggattgacaatgtgattgataacttcgac
atgagtgaacgtgcagaaagattggatgagagcgccactgcaacagaggtggaagtggta
actgagcagcttctagctgctggcctagagaagggctacaaagaggacccattcaaagca
acatgtcacaagagcaatggagacaaccttccatccattggcttccatgagaggaccaaa
aatctaatgttattccaccatagttcaccacctcgtctgcctgtcagggtcaagcaagaa
gccagtttataa
DBGET
integrated database retrieval system
