Rhincodon typus (whale shark): 109912228
Help
Entry
109912228 CDS
T06055
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109912228 (rreb1a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109912228 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-H2C2_5
zf-met
Zap1_zf1
zf-C2H2_jaz
FYDLN_acid
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
109912228
NCBI-ProteinID:
XP_048465711
LinkDB
All DBs
Position
2:139963456..140193032
Genome browser
AA seq
1764 aa
AA seq
DB search
MSRRKQPNPNKVHMGDNGSEEKGDLGQTSPAKLTGLVDDSRTQEDDDAEIESKTQTENGA
GGETGVTATQGAAVILPNNPESVDLSSVKSMMSTVMNVGNLNGDASNMPSNRSPSKPSVR
TGKIKQEAKEEKSFFICPLCEKDCGTQHQLTMHIRQHNTDSGGNTHSCSICGKSLSSASS
LDRHMLVHSGERPYKCSICHQAFTTNGNMHRHMKIHEKEPASSLGSSPPSPTKRRRPSVK
RKLSQEEGEAKEEESPSKKVTREVPSDEEEEKKTEEVLHCPICYKTFICKYGLESHMETH
PDSTLRCNLCCISFKTHRGLLRHNAIIHKQLPTDVSGKPYIQNNPTIPVGFHDLGFIDFS
CRKFPLISQVWSELNLRRCTSKFHRFVCELCNKAFPMLAALKLHLETHRGQLEGGQGLPE
PQLLPDVDVKQKAFMASLGLQHAKEAKAVKRQETTEFDIHTIWAETPPWKLPQEANCATV
KDQAPLDLASLGASLSSLSPLQDKVKILSLHPFQKGFIIQPDSSIVVKPISSESAIEFAD
IQQILQMASSAPTQISLPPLSKAPSIPNQSIYRQMPPLKPKPLVAPCTVVASTPPPLMSA
QQASSGCVSPSLLPPPLKLVKTAAGPVCSPQDLKVKPVNGAQPFLQPKTEPLSPVEMKTQ
LEQDSIIEELMPMEMNRAIKQEVMEGDLKDMITGASSKKVPALKKVLYPCRFCNQVFAFS
GVLKAHIRSHLGISPYQCNICTYIAADKAALIRHLRTHSGERPFICKICHYPFTVKANCE
RHLRKKHLKMTRKDIEKNIEYAESHTAELVDSFCSPDTVCKYCGEDLKYYRALRHHLRTH
SSCQKKPFECRECNMGFSTKNNCIRHILKQHTHVEEKEMEKHILLVDCLVGENGALSPTL
SEDSVTANGSPVSCKEPQNGFLHGPLPQGSLKMEPMGIFSMDLDEPLDFSQKNKNVSIHP
YKQEGHLLRKHASPIVAQFDSTLEPIDLSVPKNPPKDKTNVGKENKDESQLAVNGGSFAC
QQCPSTFPAKISLDKHVSTKHSPPRQGLVPARSPATLPAVVASTSLLRPLRPKPPPPLLL
PKPATGKELPPLASIAQIISSVSSAPALLKRDVKDSAEATKPTTSSDGAEDLKIGLVTKA
TPQTGTNGPAKTLGPQRAAEKTSAGVVGPGKRKGRRRSLKYKKIRPGVSSSSVDPESSGE
FASVEKMLATTDTNKFSPFLQSTNIKEEPEKEEKDSEGKEKRDIMILKGKKNSYSNSVQK
ITCPYCPRLFPWASSLQRHMLTHTGQKPFPCPKCDAFFSTKSNCERHLLRKHGVANRSLR
RNGLIARSKATDAKPLESTGNVSQSEMAVAGASTPPAAAPASPSPGPTERPGTEGSAGEG
EPKAESAVVRAGGGTEEEAEAEEDAQSNKSLDLDFASKLIDFKLGSPDPGAAPAEGRNSC
GVCGKTFKYAATLARHRKAHACERRRDRDARRGPKPEGQQSGALRSRPAKSPGSSRLEGP
TPRPEEAEVAAGVSGAGAGEGRPGVRAPQLPPGEQLELRKAPPNGTSKADKRKKICAVCS
KRFWSLQDLTRHMRSHTGERPYKCLTCERTFTLKHSLVRHQRIHQKGAKVTKRHPSENDD
DLSKDEDDSESEAERAGSSQLSDNESETVTSISLSLSNDSPLPLSFAGSPVTATTSQSPS
QAGGKAAEPENSLHRPATAVNGVRQGTFVIQGNDQESLKSSEKALADSTGSSDIIQNFLG
IPSGAPMNHVLGSVESAPCLLGVE
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgcaaacaacccaaccccaacaaagtacacatgggggacaatggatctgaa
gagaaaggagacctgggtcagacatctccagctaaactgacaggattggttgatgacagt
agaacccaagaagacgatgatgctgagatcgagtccaaaactcaaacagaaaatggagca
ggaggtgagactggggtcaccgccacccagggggcagcagtgatattgccaaacaatcct
gaaagtgtcgacttgtcttccgtgaagtccatgatgtcgacggtgatgaacgtgggcaat
ctcaacggggacgccagcaacatgccaagcaacagaagcccctcgaagccttccgtacga
acggggaaaatcaagcaggaagccaaagaagagaagtctttctttatctgtccactgtgt
gagaaggactgtggaacccagcaccagttaacaatgcacattcgacagcacaatacagat
agcggagggaacacccattcctgcagcatttgtggcaagtctctgagctccgccagctcc
ctagaccgtcacatgttggtccactcgggagagagaccgtacaagtgttcgatatgtcac
caggctttcaccaccaacggcaacatgcacaggcacatgaagatccacgagaaagagcct
gccagctcactgggctcgagtcccccatctcccaccaaacgccgaagaccctcggtcaaa
aggaaactgagccaagaagaaggggaggcgaaggaggaggaatcgcccagcaaaaaggtt
acccgagaggttccctccgacgaggaagaagagaaaaagaccgaagaggttcttcactgt
ccgatctgctacaagactttcatctgcaaatatggattggagagccacatggagacccac
cctgactccaccctgaggtgtaacctctgctgtatctcctttaagacacatcggggtttg
ctgcgtcacaacgccataatccacaagcagcttccaacagacgtgtcgggaaagccttat
atccagaacaatcccacaattcccgtgggcttccacgacctcggattcatcgacttctcc
tgccggaaattccccctcatttctcaggtctggtctgagttgaacctgaggagatgcacg
agcaagtttcaccggtttgtttgcgaattgtgcaacaaagccttcccaatgctggcggct
ctgaagctacaccttgaaacccatagggggcagctggaaggaggccagggcctgccagag
ccccagctactgcccgacgtggatgtgaagcagaaagccttcatggcgtcgttgggtctg
cagcatgccaaagaggcgaaggcggtgaaacgacaggaaaccaccgaattcgatatccac
acgatctgggccgaaacgcccccatggaaactacctcaagaggccaactgtgctactgtg
aaggatcaagcacccttagacctggcttccctgggagcgagcctgtcttctctctcacca
cttcaggacaaggtcaagatcttgtccttgcaccctttccagaagggctttataatccag
ccagatagcagtatcgtggtgaagcccatctccagcgagtccgccatcgagtttgctgac
attcagcagatcctgcaaatggcatcctctgctcccacacagatcagtctgcccccactg
tccaaggcgccttccatcccgaaccagtccatctacaggcagatgcctccactcaagcca
aagcccctggttgcaccatgcactgtcgtggcttccacaccacccccactcatgagtgcc
cagcaggcttcatctggctgcgttagccccagtctcctccctcctcctctgaagctcgtg
aagacggcagccgggcctgtgtgcagccctcaggacctgaaagtgaaacccgtgaatgga
gcgcagccctttcttcagccaaagacggagccactgagccccgttgagatgaagacccag
cttgagcaggatagtattattgaagaattgatgccaatggagatgaacagggctatcaaa
caggaagtcatggaaggagatctcaaagacatgataacgggggcatccagcaagaaagtt
cccgcattaaagaaagtcttgtatccatgtcgcttttgcaaccaggtgtttgctttctct
ggcgtgctgaaagctcacatccgctcacacctaggcatctcaccataccagtgcaatatc
tgcacgtatatcgcggcagacaaagctgcattaatccgccacctccgcacgcacagtggc
gagaggccctttatctgtaaaatctgccactaccctttcacagtgaaagccaactgtgag
aggcacctgcgcaagaagcacctcaagatgacccgcaaggacattgaaaagaacattgag
tacgcagagagccacaccgcagagctggtagactctttctgctcaccagacaccgtgtgc
aagtactgcggcgaggacctcaagtactaccgtgccctccggcatcatttgaggacacac
agcagctgtcagaagaaacccttcgagtgccgagagtgcaacatgggcttctccaccaag
aataactgcatccgccacatcctcaagcagcacacccacgtcgaggagaaggagatggag
aagcatatcctgttggtggactgcctcgtgggtgagaatggggcactgtcccccacctta
tctgaggacagcgtcactgcaaatggctctccagtctcgtgcaaggagcctcagaacggg
tttttacatggaccactgccccagggctccttaaaaatggagcccatgggtattttttca
atggacttggatgaaccgctggatttttctcaaaagaacaagaatgtgtctatccacccc
tacaaacaggagggccacttgctcaggaagcatgcttcgcccattgttgcacagtttgac
agcacgctggagcccatagacctgtccgtccccaaaaaccctccaaaggataaaacaaat
gtgggcaaagaaaataaggatgaaagccagctggctgttaatggtggctcatttgcctgt
cagcagtgcccgtctaccttcccagcaaagatcagcctcgataaacatgtaagtacgaaa
cattctccaccacggcagggtttggtgccagcccggagtccggccacactcccagctgtg
gttgccagcaccagcctactgcgacccctgaggcctaaaccaccgcctccgctgctcctg
cccaaacctgccacgggcaaagagctgccacccctggcttccatcgcccaaatcatttct
tctgtctcatctgcccccgccttgctgaagagggatgtcaaggacagtgccgaagctacc
aagcccaccacctcgtctgacggtgcggaggatttaaagatcggcctggtgaccaaggcc
actccccaaacgggaactaacggcccagcaaagactttgggcccacaacgcgccgcagag
aaaacatcagcaggggtggtggggccaggcaagaggaaagggagaaggcgaagtctcaag
tacaagaagattcggcctggtgtcagcagcagtagcgtagacccagagtccagcggggaa
tttgccagcgtggaaaaaatgttggccacgaccgacaccaacaagttcagtcctttccta
caatccaccaacatcaaagaggaacctgaaaaggaggaaaaagattccgagggaaaggaa
aagcgagacataatgatcttgaaggggaaaaaaaattcctactctaactcagtgcaaaaa
atcacttgtccgtactgcccacgcctgtttccttgggctagttcacttcagcgccatatg
ttaacacacacaggtcagaagcccttcccctgtccaaaatgtgacgctttcttttccacc
aaatctaactgtgaacgccacctcttgcgcaagcatggtgttgccaaccggtcactgcga
agaaatggcctgattgccagatccaaagcaactgatgcaaagcccctggaaagcacaggt
aatgtttcccagtcggagatggcagtagccggggcctcgacacctccagcggcggcacca
gcctctccttcgcccgggcctacggagcggcctggaaccgagggctctgcgggcgagggc
gagcccaaagcggagtcggcggtggtccgggccgggggcggcacggaagaggaggccgag
gccgaggaggacgctcagagcaacaagagcctggacctggatttcgccagcaagctgatc
gacttcaagctgggcagccccgacccgggcgcggcgccggccgagggccgcaactcgtgc
ggcgtctgcgggaaaaccttcaaatacgccgctaccctggcccgccacaggaaggcccac
gcctgcgagcgtcgccgggaccgggacgctaggagaggcccgaagcccgagggccagcag
tccggggccctccgctcacggcccgctaagagcccgggctcctcccggttagagggcccg
acaccgcggccggaggaggcagaggtagcggcgggagtgtcaggagcaggggcaggggag
ggccgccccggagtccgcgcgccccagctcccccccggggaacagctcgagctcaggaag
gccccgcccaacggcacgagcaaagcggacaaacggaaaaagatctgcgcggtttgcagc
aaacggttctggtccctgcaggatctcacccggcacatgcggtcacacaccggtgagagg
ccatacaaatgcttgacctgtgagaggacattcaccctgaaacacagccttgtccgccat
cagcgcatccatcagaagggagccaaggtgaccaagagacacccgagcgagaatgatgac
gatttgtccaaggatgaggacgacagtgagagtgaggctgagcgagcgggctctagccag
ctgtcggacaacgagagcgagacggtcaccagcatcagcctcagcctcagcaatgactcg
ccgctgccactgagctttgcagggagcccagtgacagccacaacgagccagtctcccagc
caggcgggcggcaaagcagccgagccggagaacagcctccatcgcccggcaacagcagtc
aatggcgtgaggcaaggaaccttcgtcattcagggcaacgaccaagaatcgttaaaaagc
tcggaaaaggcgcttgccgattccacgggctcctcggacatcatccagaactttctggga
atacccagcggggcgccaatgaaccacgtcctgggctcggtagagtctgctccatgtctg
ctcggagtggagtaa
DBGET
integrated database retrieval system
