Rhincodon typus (whale shark): 109912257
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Entry
109912257 CDS
T06055
Symbol
si:dkey-251i10.3
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109912257 (si:dkey-251i10.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109912257 (si:dkey-251i10.3)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109912257 (si:dkey-251i10.3)
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Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
109912257
NCBI-ProteinID:
XP_020367247
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Position
14:41900183..41941259
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AA seq
794 aa
AA seq
DB search
MEPVQGEERGRCRDLLSLGMEEEDLFHTEHALTASEDEDASDDERRHQKLLEAISSLGNK
RKPKLTERTEASLQVSEFTVSSEGANEKIQLSDLLGTIKPSLSTVKKQLKTFEKTNKTLD
LPLSKQQTEKIQRSLAYEKTSKAVTKWNHTVLQNRRAEQLVFPLNAEPLTVKPVEEMIAG
WKARTPLEQEIFSLLHKNKQPVTVPALTAAEQASVRAMSLEEAKERRAELQKARVLQSYY
EAKAKRSKKIKSKKFHKVMKKVKQKEILKQFEELKKTKPEEALEELSKMEQRRIEERMTL
RHQNSGKWAKSKVIMAKYDAEARSAIQKQLEKNKMLTTKVLVPSDSEDEVVPKVDRDETV
PDFVNDAEMNTVANPWMVGRLSADPKSFEARETELVIPAKIDQNEGSDDEEDLSEDELLL
QEFEKKRTIRKEGDGELAGSSAIVDESKDDESMKNNDERERAVPGDQSEKEKHFEEDVNE
FNHLFRKLIENKSEPTSRNPKKYQRKSKEMSLEKSEEDAQTLENQEEPILDEQLERKRTV
EDLETLIQEECHNLNEASALNTPRLSGDAINSENKTNATTEVRTNHLINPKKVLNITSKI
IKMPLVPTAVEEENEEYEDQRMVIQEAFASDDVIDDFIKDKQKQIDASKPKDIDLTLPGW
GEWGGQGLQPSGKKRRRFRIKAAPPPPRKDQNLPNVIINEKRDIGVAAHQVNELPFPFSH
QNQFEKSICAPIGSTWNTEKVMQKLTLPKVVTKMGTIIEPISEDDLLQEKKKSVKSKVGQ
HPCKHRKMQKKSFH
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggagccggtgcagggagaagagagaggacggtgcagagatttactttcacttggaatg
gaagaagaggatttgtttcacactgaacatgccttgactgccagtgaggatgaggatgcc
agtgatgatgagaggaggcatcaaaaattattggaggcaattagttccctcggtaacaag
agaaagccgaagttgacagagaggacagaagccagcttgcaggtgtctgaattcacggtc
agttcagaaggtgctaatgagaagattcagctatcagatctgctgggaaccattaaacca
tcgctgagtactgtgaaaaaacagctcaagacatttgagaagacaaacaaaaccctagac
ttacctctaagcaaacagcaaactgaaaagattcaaaggtcattggcatatgagaaaacg
tcaaaagcagttacaaagtggaatcatactgtgctacagaaccggagagcagaacagctc
gtctttccactaaatgcagaacctctaactgtcaaaccagtggaagaaatgatagcaggc
tggaaggcacggacacccttggaacaggagattttcagcttgcttcacaagaacaagcag
ccagtgactgttccagcattgacagctgcagaacaagcttctgtccgagctatgagccta
gaggaggcaaaggaacgtcgagctgagctgcagaaagcaagggtccttcagtcctactat
gaagctaaagcaaaaagatcaaagaaaatcaagagcaaaaaattccacaaagtgatgaag
aaggttaaacagaaagagattttgaagcagtttgaagaactaaagaaaactaagcctgag
gaagctcttgaagaactgagtaaaatggagcaaagacgaatagaggaacgaatgacactt
cgacatcaaaacagtggaaagtgggccaaatctaaagttatcatggcaaaatatgacgcg
gaggctcgcagtgcaatccagaagcagctggagaagaacaaaatgctcacaacaaaagtc
ctagttccatcagatagtgaggatgaagttgtaccgaaggtggacagggatgagactgtt
ccagattttgtgaatgatgctgagatgaacacagtagcaaatccttggatggtgggaaga
ttgagtgctgatccaaagagttttgaagcacgagaaactgagcttgtcattcctgcaaaa
attgatcagaatgaaggatcagatgatgaggaggacctctctgaagatgagttactgctg
caagagtttgagaaaaaacggacaattcgtaaagaaggtgatggtgaactggctggatca
tctgctattgtagatgagagcaaagatgatgaaagtatgaaaaataatgacgaacgggaa
agggcagtccctggtgaccaaagtgagaaagagaaacattttgaagaagacgtgaatgag
tttaatcacctttttcggaaattgattgagaataaatctgaacctacgtcaagaaaccct
aagaagtatcaaagaaaaagcaaggaaatgtcacttgagaagagtgaggaggatgcacag
acactagaaaaccaagaagaaccaatactcgatgaacagttagagcgcaaaaggacagtg
gaagatttggaaactttgattcaggaagaatgtcataatcttaatgaggcctcagccttg
aatacaccacggctcagtggagatgcgatcaattcagaaaataaaacaaatgctacaaca
gaagttagaacaaaccatctcatcaatcctaagaaagtattgaatattacatccaaaatc
attaaaatgcctttggttcctacagcagtagaagaggagaatgaagaatatgaggaccag
cgcatggtcattcaggaggcctttgcatcagatgatgtcattgatgatttcataaaagat
aagcagaaacagattgatgctagcaaaccaaaagacattgacttaaccttgccagggtgg
ggtgaatggggaggacaaggtctccaaccaagtggaaagaaaagaagaaggttccgcatt
aaagctgctccacctccacccaggaaggatcaaaatttgccgaatgttataatcaatgag
aagcgagacattggagttgcggcacaccaggtaaatgaactacctttcccattctcacat
cagaatcagtttgagaagagtatctgtgcccctattgggagtacatggaatactgagaaa
gtcatgcagaaattgacgctgccaaaagttgtgacaaaaatgggaacaataattgaacca
atctctgaagatgatctgcttcaagagaagaagaaaagtgtgaaatcaaaagtaggacag
catccttgtaaacacagaaaaatgcagaagaaatcatttcattga
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