Rhincodon typus (whale shark): 109912279
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Entry
109912279 CDS
T06055
Symbol
vps25
Name
(RefSeq) vacuolar protein-sorting-associated protein 25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109912279 (vps25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109912279 (vps25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109912279 (vps25)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
109912279 (vps25)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109912279 (vps25)
Exosomal proteins of colorectal cancer cells
109912279 (vps25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
DUF2555
Motif
Other DBs
NCBI-GeneID:
109912279
NCBI-ProteinID:
XP_020367267
LinkDB
All DBs
Position
30:complement(24707237..24723766)
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AA seq
174 aa
AA seq
DB search
MTFEWPWQYNFPPFYTLQPNVNTQRKQLAAWCSLVLSYLRYHKLYTIDVLEAQESPLFHN
KKIQRKFPIEAIQVVFEELRKKGNLEWIDKNKTRCLIMWRRPEEWGKLVYQWVSKNAMTN
SVFTFYELSNGDDTEGEEFHGLEEWLLLRALQSLQAERKAEIITLNDSKGVKFF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgagtggccttggcagtataacttccctcctttctacacactacagccaaat
gttaatacccagcgtaagcaactggcagcatggtgttcattggtgctctcctacctgcgt
tatcacaagctttacactatcgatgtattggaagcccaagaaagcccactcttccacaat
aagaagatccaacgcaagtttcccatagaagctatccaagttgtatttgaagaactccgg
aaaaaaggaaacttagagtggattgataaaaataaaactcgctgtctcataatgtggagg
agaccagaagagtgggggaaacttgtgtatcagtgggtctcaaagaatgccatgacaaat
tctgtatttacattttatgaactctctaatggagacgatactgaaggcgaagagttccat
ggtttggaggaatggcttctgctacgagcactgcagtctttgcaagctgagcgaaaagcg
gagatcatcacccttaatgacagcaaaggggtcaagttcttctga
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integrated database retrieval system
