Rhincodon typus (whale shark): 109912316
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Entry
109912316 CDS
T06055
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109912316
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109912316
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
109912316
NCBI-ProteinID:
XP_048456356
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All DBs
Position
8:58978198..59336611
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AA seq
508 aa
AA seq
DB search
MMAAAPIQQNGTHTGLPIDLDPPDSRKRPLEAPPEAGNTKRTNTGEDGQYFLKVLIPSYA
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHSFIAEKI
REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSTPSDPMTTTRANQVKIIVPN
STAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQK
IQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAF
PAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAAA
NLLATYANEASGGGSPVSGTAGTFALGSLAAATAATNGYFGAASPLAASAILGSEKSTDG
SKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPA
ATQAAQYLITQRITYEQGVRAANPQKVG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctcccatccagcagaacgggacccacaccgggcttcccatagacctg
gacccccccgactccagaaagcggccgctcgaagctcctcctgaagcgggcaacaccaag
agaaccaacactggcgaagacggccaatattttttaaaagtccttatacctagctatgct
gccggatctattattggaaagggaggacaaaccattgtccaactgcagaaagagactggt
gccacgatcaaactgtccaaatccaaagatttctacccaggaacgacagagcgtgtctgc
ctgatccagggaacagttgaagctctgaatgctgttcacagcttcattgcagagaagata
cgagaaatgcctcagaatgtggcaaagacagaaccagttagcatcctgcagcctcagacc
accgtgaacccagatcgcatcaaacaaacattgccatcttccccaactaccaccaagtcc
actccatctgaccccatgaccaccaccagagccaatcaggtgaaaataattgttcctaac
agcactgcaggtctgatcattgggaagggtggtgccacagtgaaagctgtcatggagcag
tcaggagcttgggtacaactctctcaaaagccagacgggataaatttgcaagagagagtg
gtgacggtgagtggggaaccggaacaaaaccgcaaagccgtcgaacttatcatccagaaa
atccaggaggacccacagagtggcagctgtcttaatatcagctatgccaatgtcactggt
ccagtggccaactccaacccaacgggatccccttatgccaacactgctgaggtgttgcca
actgctgcggccgccgcggggctgttaggacacgctaacctcgctggagtcgctgccttc
ccagcggttttatccggcttcacgggaaacgacctggtagccatcacctctgcactcaac
actttagccagctatggatataaccttaacacactgggtttgggcttgagtcaagctgca
gccacgggtgcattggcggcagctgcagctagtgcaaatcccgccgcagcggccgcagca
aacctactggctacatacgcgaatgaagcctcgggcggtggcagcccggttagtggaaca
gcggggacttttgccctcggtagccttgctgccgctaccgctgccacaaatggctacttc
ggcgctgcctctccactggctgccagtgccatccttggctcagaaaaatctacagacgga
tcaaaggacgtggtcgaaatagcggtcccagaaaacctagttggtgcaatattggggaaa
ggcgggaaaacgttagtggagtatcaggagttgactggtgcaaggatacagatctccaaa
aagggggagtttgtgcctggcacaaggaatcggaaggtgaccattacaggaacgccagct
gctacccaggctgctcagtatttaatcacacagcggatcacttatgagcaaggtgttcgg
gcagccaacccacagaaagtcgggtga
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