Rhincodon typus (whale shark): 109912377
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Entry
109912377 CDS
T06055
Symbol
lhfpl4a
Name
(RefSeq) LHFPL tetraspan subfamily member 3 protein isoform X1
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109912377 (lhfpl4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109912377 (lhfpl4a)
03037 Cilium and associated proteins [BR:
rtp03037
]
109912377 (lhfpl4a)
Transporters [BR:
rtp02000
]
Other transporters
Pores ion channels [TC:
1
]
109912377 (lhfpl4a)
Cilium and associated proteins [BR:
rtp03037
]
Other cilia and associated proteins
Stereociliary proteins
109912377 (lhfpl4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
Claudin_2
PMP22_Claudin
Bestrophin-like
Atthog
Motif
Other DBs
NCBI-GeneID:
109912377
NCBI-ProteinID:
XP_048462475
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All DBs
Position
16:14838496..15002100
Genome browser
AA seq
274 aa
AA seq
DB search
MLPSQEASKIYHNNYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWIGDSVDTPYAGYFG
LFHYCIGTGLSSRDLICQGTFSDFSSIPSGAFKAAAFFVLLSMVLILGCITCFALFFFCN
TATVYKICAWMQLLAAVCLVLGCMIFPDGWDSEAVRKMCGNKTGKYTLGNCSVRWAYILA
IIGILDALILSFLAFVLGNRQNELLQEDLKVENKDFTGAAKHQDSLPQPQVRIRPQIQRL
LPSQQHLPQQQLLRLPLLKLCSPAQLLFHLHHNH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcacaggaagcctctaaaatctaccataacaattacatgcggaattccaga
gccatcggtgtgctgtgggccatcttcaccatttgcttcgcgatcattaacgtggtggtt
ttcatccagccttactggatcggggatagtgtcgacactccctacgccggctactttggc
cttttccattactgcatcgggacaggtttaagcagccgggatttaatatgtcagggaacc
ttctccgacttctccagcatcccctcgggtgccttcaaagcggcggcgttcttcgtgctg
ctctccatggtgctgatcctcggctgcatcacctgcttcgctctcttcttcttctgcaac
accgccactgtctacaagatctgcgcctggatgcagctcctggcagctgtttgtcttgtt
ttgggctgcatgatatttcctgatggatgggactcggaagctgtgagaaagatgtgcgga
aataaaacagggaaatacacactgggaaactgttctgtgcgctgggcctatatcctggct
atcatcggcattctggatgcattaatcctctccttcctggcattcgtacttgggaatcga
caaaatgaactccttcaggaagacctcaaagttgagaacaaagatttcaccggtgccgcg
aaacatcaggactctctgcctcagccacaagtcagaattcgcccccaaattcagaggctc
ctgcccagccaacaacatctgcctcaacaacagcttctgcgtctcccactgctcaagttg
tgctcaccagcacagctcctatttcaccttcatcacaatcattag
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