Rhincodon typus (whale shark): 109912406
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Entry
109912406 CDS
T06055
Name
(RefSeq) broad substrate specificity ATP-binding cassette transporter ABCG2-like
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp02010
ABC transporters
rtp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109912406
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
109912406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109912406
04147 Exosome [BR:
rtp04147
]
109912406
04090 CD molecules [BR:
rtp04090
]
109912406
Transporters [BR:
rtp02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
109912406
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of breast milk
109912406
CD molecules [BR:
rtp04090
]
Proteins
109912406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
SMC_N
ABC2_membrane_2
AAA_23
ABC2_membrane_3
AAA_29
RsgA_GTPase
Adeno_IVa2
AAA_18
DUF87
Motif
Other DBs
NCBI-GeneID:
109912406
NCBI-ProteinID:
XP_048465108
LinkDB
All DBs
Position
20:2089394..2194602
Genome browser
AA seq
644 aa
AA seq
DB search
MDLMQSSKGSVVSFHNVQYSVNISSGIPYICKVTRKQILYNINGVLNPGLNAILGPTGSG
KSSLLDILAARKDCRGLSGQVLIDGIPQPSNFKCISGYVVQDDILMGTLTVRENLLFSAA
LRLPSSIRFKEKEEKVEQIISQLGLTKVSDSKVGTELIRGVSGGERKRTHIGMELITDPP
VLFLDEPTTGLDSNTAKSVLTLLKRLSRYGRTIIFSIHQPQYFIFKLFDSLTLLLNGRMV
YHGPANTALQYFSSIGYECETFNNPADFFLDVINGDSTPVVTNSKENHQLAVGLDNENSE
KTFAEKLAESYMKSSQYQETVEMLMQIEGIRGDRGIKEIQMQSITYTTSFLHQLFWVSNR
IFKNFIRNPQSSIAEVFLNSLLGLFLGAIYFGLKLDSSGIQNRVGSFHFLASYECFSSVS
AVALFIQARKIFIHEYISGYYRISAYFLATIIGDLLPVRTLPAIVFSCITYWMVGYQRNL
ANFLFFMLILLLTSYAATSLAMAVSAGLDTITTAGVVINGIFVFAMTFSGLLVNLPSISK
GLNWLQYFSIPRYSFEALQVNEFRNLYFCNHEQRNVTALSQAVANCSGNLSPSKGICYGE
EYLCGQGSGFDLWAIWKNITALACITIIFLIIAYVNLRCMKKFT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggatttgatgcaaagctccaaggggtctgtggtcagcttccacaatgtacaatattcg
gtcaatatctccagtggcataccatacatttgcaaagtgaccagaaaacaaatattgtac
aatatcaatggcgttttaaaccctggattaaatgctatccttggcccaacaggcagtgga
aagtcttcattactggatattctggctgcaagaaaggactgcagagggctatctgggcaa
gtcctgattgatggaattccgcaaccttccaatttcaaatgcatctctggttatgttgtt
caggatgatattctcatgggaacattgactgtgagagaaaatttgctgttttctgcagct
ttgcggttgcctagttcaattaggtttaaggagaaagaagaaaaggtggagcaaatcatc
tcacaacttggtctaacaaaggtgtctgacagcaaggttggtacagaattgatccgaggt
gtctctggtggggaaagaaaaagaacacatattggtatggaactcataactgatcctcct
gttttgtttttggatgagcccacaacaggcttggattccaacactgcaaaatctgtgttg
acactgttgaaaagactatcgagatatggtcgaacaattatattctctatccaccaacct
caatactttatatttaagctttttgatagcctgacactgctgttgaatggaagaatggta
tatcatggtccagccaacactgcattacagtacttttcatctattggctatgagtgcgaa
accttcaacaatccagcagatttctttttagatgttattaatggagactccactccagtt
gtcactaatagtaaagaaaatcatcagctggcagtaggtttagacaatgaaaattcagaa
aaaacctttgcagagaagctggctgaatcctatatgaaatcaagccaatatcaagagaca
gtggaaatgcttatgcagatagaagggattaggggtgatagaggaataaaagaaatacaa
atgcagtcaattacatatacaacaagcttcttacatcaacttttctgggttagtaaccgg
atatttaagaattttattcgaaacccgcagtcatctattgctgaggtttttcttaatagt
cttctgggattgtttcttggtgcgatctattttggactaaaacttgattcaagtggaatt
caaaacagagttggttctttccatttccttgcttcctacgagtgctttagtagtgtgtct
gctgtggcattgttcatccaagccaggaaaattttcattcatgaatatatcagtggatat
tacaggatttcagcatacttcttagcaacaataataggggacttattacccgtacgaact
ctgcctgccattgtattttcgtgtataacctattggatggttggttatcagaggaatctt
gccaattttttattctttatgctaattctgttactgacatcatatgcagctacatccctg
gctatggccgttagcgctggattagatacaattactactgcaggtgtggtaatcaatggt
attttcgtttttgcaatgaccttttctggccttcttgtgaacttgccaagtatttcaaag
gggctgaactggctgcaatatttcagtatccctaggtacagctttgaggcactgcaggta
aatgaattcagaaatctgtacttctgtaatcatgaacaaaggaatgtcacagcactatca
caggcggtagccaattgctcggggaacctgtcaccaagtaaaggaatatgttatggtgaa
gagtacttgtgtgggcaaggaagtggatttgatttgtgggccatatggaagaacattacc
gcacttgcatgcatcacaataattttcctgatcattgcatatgttaatcttaggtgtatg
aagaaattcacataa
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