Rhincodon typus (whale shark): 109912466
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Entry
109912466 CDS
T06055
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
109912466 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rtp03051
]
109912466 (psmc6)
Proteasome [BR:
rtp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
109912466 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
AAA_22
PRS7_OB
RuvB_N
nSTAND3
AAA_lid_PRS2_C
AAA_14
Prot_ATP_ID_OB_N
DUF815
AAA_7
AAA_11
AAA_33
TIP49
RNA_helicase
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
TPR_MLP1_2
bpMoxR
DUF5906
AAA_28
AAA_24
TsaE
NACHT
ATPase
AAA_25
AAA_17
Occludin_ELL
ATPase_2
DUF3829_2nd
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
109912466
NCBI-ProteinID:
XP_020367487
LinkDB
All DBs
Position
8:42159092..42179549
Genome browser
AA seq
389 aa
AA seq
DB search
MADPREKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLEKSKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGNVTYSEIGGLAEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHAGPITKHGEIDYEAVVKLSDGFNGADLRNVCTEAGMFAIRADRD
YVIQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgagggagaaggcgcttcaggattataggaaaaaactattggagcacaaa
gagatcgacggccgcctgaaagagttaagagaacagctgaaagaactaaccaagcagtat
gaaaagtctgaaaatgacctcaaagctcttcagagtgtgggacagattgtcggtgaagtg
ttgaaacagcttacagaagagaagtttattgtgaaagctacaaatggaccacgatacgtt
gttggctgtcgtcggcagcttgaaaaaagcaagttgaaacctggtactagagttgccctg
gatatgacaaccctgactataatgaggtatttgccaagagaagtagaccccttggtgtat
aacatgtctcatgaagatccaggaaatgttacttactccgaaattggtggattagctgaa
caaattagggaattacgagaggttattgagctgccacttacaaacccagagttgttccaa
cgtgtaggaatcattccaccaaaaggttgcttactctatggaccaccaggtacaggaaaa
acactcttagcaagggctgttgctagtcagttagactgcaacttcttaaaggttgtttcc
agctccattgttgataaatatattggtgaaagtgctcgtttaatcagggagatgtttaac
tatgccagggatcatcaaccatgcattatttttatggacgagattgatgctattggtggt
cgccgtttctctgaaggcacctcagctgatcgtgaaattcagagaactcttatggagcta
ttaaatcaaatggatggttttgatactcttcatcgagttaaaatgataatggctacaaac
aggcctgatacgttggatcctgctctgttacgtcctggtagacttgatagaaagattcat
atcgagcttccaaatgagcaagcaagattggatattctgaagatccatgctggtcccatc
acaaagcatggggaaatagattatgaagcagttgtcaagctgtcagatggatttaatggt
gcagatttgagaaatgtctgcactgaagcaggtatgtttgctatccgtgctgatcgtgac
tatgttatccaagaggactttatgaaggctgttcgcaaagttgctgactctaagaagcta
gaatccaagcttgactacaaacctgtataa
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integrated database retrieval system
