KEGG   Rhincodon typus (whale shark): 109912476
Entry
109912476         CDS       T06055                                 
Symbol
ctnnb1
Name
(RefSeq) catenin beta-1
  KO
K02105  catenin beta 1
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04310  Wnt signaling pathway
rtp04510  Focal adhesion
rtp04520  Adherens junction
rtp04916  Melanogenesis
rtp05100  Bacterial invasion of epithelial cells
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109912476 (ctnnb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109912476 (ctnnb1)
   04520 Adherens junction
    109912476 (ctnnb1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    109912476 (ctnnb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109912476 (ctnnb1)
   05100 Bacterial invasion of epithelial cells
    109912476 (ctnnb1)
SSDB
Motif
Pfam: Arm ARM_ARMC5 Cnd1 HEAT_2 HEAT_EZ Adaptin_N ARMC9_ARM KAP Atx10homo_assoc Queuosine_synth
Other DBs
NCBI-GeneID: 109912476
NCBI-ProteinID: XP_020367502
LinkDB
Position
2:complement(141841315..141878587)
AA seq 781 aa
MTTSADLMELDMAMEPDRKAQVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEEVDTS
QVLYEWEQGFSQSFTPEQVTDIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPT
NVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSK
KEASRHAIMRSPQMVSAIVRTMQNTSDVETARCTAGTLHNLSHHREGLLAIFKSGGIPAL
VKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDC
LQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA
GGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCA
AGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEM
AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL
VRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFV
QLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLF
RMSEDKPQDYKKRLSVELTSSLFRTEPMTWNEAGDLGIDIGGQGEPLGYRPDDPSFRSYH
PGGYGQDTMGIDPMMEHDMGGHHPGAEYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTD
L
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgactacctcagctgatttgatggaactggacatggccatggagccagatcgtaaagcc
caggtcagtcactggcagcagcagtcatatttggattcaggtattcactctggagccaca
actacagccccttcactgagtggaaaaggcaacccagaagaggaagaagtggataccagt
caagtgttatatgaatgggagcaaggtttctctcagtctttcacaccggagcaagtaact
gatattgatgggcaatatgctatgaccagagcccagcgggttcgtgctgcaatgtttccc
gaaacactggatgaaggaatgcagatcccgtcaacacagtttgatgctgcacatccaact
aatgttcagcgcctggctgaaccatctcagatgctgaagcatgctgttgttaacctgatc
aactatcaggatgatgcagaactggctacccgtgctatcccagaactgacaaaactactc
aatgatgaggaccaggttgttgtaaacaaagctgctgtgatggttcatcagctgtcaaaa
aaagaagcctcccgccatgccattatgcgctctcctcagatggtatctgctattgtccgt
accatgcagaataccagtgatgtggagactgcacgctgcactgctggaaccctacataac
ctgtctcaccatcgtgaagggttgctagctatcttcaaatctggaggcatccctgccctg
gtgaaaatgcttgggtctccagtggattctgttctgttctatgccataacaacccttcac
aacctgttgttgcaccaggaaggagccaagatggcagtgcgtctagctggtgggctgcag
aaaatggttgccttgctaaataagaccaatgtcaaatttttggctatcacaacagattgt
cttcagatattggcctatggtaaccaagaaagcaagttgatcattttggcaagtggagga
ccccaggcacttgtcaatatcatgaggacctatacttatgagaagttgttgtggaccacc
agccgtgtactgaaagtgctgtctgtctgctccagtaacaaacctgcaatagtggaagct
ggtggaatgcaggctcttggactgcatcttacagatccaagtcaacgacttgttcagaat
tgtctttggaccctgagaaacctgtcagatgctgcaactaagcaggagggaatggaaggt
ctgctaggaactcttgtgcagcttctagggtcagatgatattaacgttgtgacatgcgca
gctggtatactttctaacctgacgtgtaacaactacaaaaacaagatgatggtctgccag
gttggtggtattgaggctttggtgcgcactgtcctccgagctggtgacagagaagacatc
actgaacctgccatttgtgcccttcgtcatttgaccagcagacatcaggatgcagaaatg
gcccaaaatgctgtgcgactccactatgggctacctgtagtggttaaactcctgcaccca
ccgtcacattggcctttgattaaggctactgtcggtctgatccgcaatctggctttgtgt
ccagctaaccatgctccacttcgcgagcaaggcgccattccaagattggttcagttgttg
gttagagcacatcaagacacccagcgtcgtacatcaatgggaggcacgcagcagcagttt
gtggagggagtgcgaatggaggagattgtagaaggctgcactggagcccttcatattctt
gcacgtgatgttcacaacaggattgttatcagaggactcaataccattccattgtttgtc
cagctactgtactctccaattgagaatatccaacgagtggctgctggtgtactgtgtgaa
ttggctcaggataaggaagcagctgaagctattgaggctgaaggggccacagcacctctc
acagagctgctacactcgagaaatgaaggcgttgctacctatgctgcagcagtattgttc
cgtatgtctgaagacaaaccgcaggattacaaaaaacgtctctcggttgagcttaccagc
tcactgttcagaaccgagcctatgacatggaatgaggcaggagatcttggaattgacata
ggaggccaaggtgaacctcttggataccgtccagatgatcctagctttcgctcttaccat
ccaggcggatatggacaagacaccatgggtattgatccgatgatggagcatgatatgggt
ggtcaccaccctggtgcggagtacccagttgatggcctgccagaccttggacatgcccag
gacttgatggatgggcttcccccaggtgacagtaatcagctggcctggtttgatacagac
ttgtaa

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