Rhincodon typus (whale shark): 109912522
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Entry
109912522 CDS
T06055
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109912522 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtp01001
]
109912522 (limk1a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109912522 (limk1a)
Protein kinases [BR:
rtp01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
109912522 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
RIO1
Haspin_kinase
PDZ_2
ABC1
B2
Motif
Other DBs
NCBI-GeneID:
109912522
NCBI-ProteinID:
XP_048468625
LinkDB
All DBs
Position
26:32458788..32511814
Genome browser
AA seq
728 aa
AA seq
DB search
MREKEREAAVLQELHCCVVCSDPFIRSQDQLPVGQPASVSLGVCLSLREGVQRAVVVGCS
FGAGSTHSASREAGCRVWMWLMLLCCTWRDDRMGEEEGGCFPCCAGCGRSIYDGQYLQAL
NTDWHNACFRCCECNISLSHWYYEKEGRLYCKKDYWARFGELCHGCCERITKGLIMVAGE
HKYHPECFVCLKCGVFIGDGDTYALVERSKLYCGCCYYQTVVTPVIEQILPDSPCPQIPH
TVTLVSIPASTEGKRGFSVSIDQSCSPRSSSSEHVHTVRVKEVDAGCISPDVKNSIHVGD
RILEINGTPIRNVPLDEIDLLIQETSRLLQLTIEHDPHDMLLEDQAETISPMSDIYSPRK
LSAPNGEGSTVKKRPIMRSCSIDKSPSTGSPASQKKDLGRSESLRIASKMHRIFRPSDLI
HGEVLGKGYFGQAIKVTHRETGEVMAMKELIRFDEETQRTFLKEVKVMRCLDHPNVLRFI
GVLYKDKRLNFITEYIKGGTLRSIIKDLDRPLPWNHRVSFARDIAEGMSYLHSMNIIHRD
LNSHNCLVRENNTVVVADFGLSRLMVDDKKQTDNQSPGDLSTMRKPDRKKRYTVVGNPYW
MAPEMINGKSYDEKVDIFSFGIMLCELIGRVNADPDYLPRTTDFGLNVPVFLDRYCPEEC
PAAFFPIAVMCCDLDPEKRPSFMKLEQWLLALKLHVEMHLALTSDLEQINHSFFQNHSRS
KEKLLEAM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaaagagagagaggcggctgtgttgcaggagttgcattgctgtgtagtttgc
agtgatcctttcatcaggtctcaggatcagctgccagttggccaacctgcgtctgtctca
ctcggtgtctgtctgagtctgagggagggagtacagagagctgtagtggttggatgttca
tttggagctggttccacacactcggcttcacgggaggcaggctgtcgggtctggatgtgg
ttgatgctgctgtgctgtacctggagggacgatcggatgggagaggaggagggaggatgt
tttccatgctgtgcaggatgtgggcgctctatctatgatggtcagtatctccaggcccta
aatacagactggcacaatgcctgcttcagatgctgtgagtgtaacatctcgctctctcac
tggtattatgagaaggaaggccggctgtactgtaagaaggattactgggccagatttggg
gagctgtgccatggctgctgtgagcgtatcaccaaagggctgatcatggtcgctggagaa
cacaagtaccaccccgaatgctttgtgtgcctgaagtgtggtgtatttattggagatgga
gacacctatgcattggtagaacgctccaaactctactgtggttgctgctattaccagacg
gtagttacgcctgtaattgaacaaatcctcccagactctccctgccctcagatcccacat
actgtgactttggtttcaatcccagcctccacggagggaaagcgaggcttctctgtgtcc
atcgatcagtcctgcagtcccagaagttcctcttcggagcatgtgcacaccgtacgggtc
aaagaagttgatgctggttgcatcagtccagatgtgaaaaactccattcacgttggtgac
aggatcctggaaatcaacggaacgccaatcaggaatgtgcctctggatgagattgacctc
ctgattcaagaaaccagtcgcttgctccagttaaccattgaacatgatccccacgacatg
ttgctggaggaccaagcagagaccatcagcccgatgtctgatatttacagcccacggaaa
ttaagtgcccctaatggagaaggtagcacggtcaaaaaacgccccatcatgagaagctgc
agtattgacaagtcgccaagcactggatcacctgcctctcaaaagaaagatttgggccgc
tcagagtctctgcggattgcctcaaaaatgcatcgtatcttccgcccttctgacctgatc
catggtgaagtgctgggaaaaggctattttggacaggctattaaggtgacacatagagag
acaggagaggtcatggcaatgaaggaactgattcgctttgatgaagaaacccaaaggact
ttcctgaaagaggttaaggtgatgcgctgtcttgaccatccgaatgttctgaggttcatt
ggtgtcctttataaagataagaggctgaacttcattacagagtacatcaaaggaggaaca
ctgaggagcatcatcaaagatttagaccgtccattgccatggaaccatcgtgtgagcttt
gctagggacattgctgaagggatgtcctatctgcattccatgaacattatccatcgggat
ttgaactctcacaactgcctagtgcgtgagaacaatactgtagtggttgctgattttgga
ctgtctagactaatggttgatgataaaaagcagacagacaatcagtcaccaggagaccta
tccaccatgagaaagccggacagaaagaaacgttacactgtggtgggaaatccttactgg
atggctccagagatgataaatgggaaaagctacgatgagaaagttgacatcttttccttt
gggataatgctgtgtgagctgattggtagagtaaacgcagacccagattacctgcccagg
acaacagatttcggattgaatgtccctgttttcttggatcgatactgtccagaggaatgt
cctgctgccttcttcccaattgcagtcatgtgctgtgacttggatccagaaaagagacca
tcctttatgaagctggaacagtggttactagcgctgaaattgcatgtggagatgcacctt
gctctcacctctgaccttgaacagatcaatcattccttcttccagaatcattcaagaagc
aaagagaaacttctggaagccatgtga
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