Rhincodon typus (whale shark): 109912525
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Entry
109912525 CDS
T06055
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109912525
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109912525
Spliceosome [BR:
rtp03041
]
Complex C
Other components
Complex C specific factors
109912525
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109912525
NCBI-ProteinID:
XP_048464496
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Position
19:11895834..11949428
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AA seq
618 aa
AA seq
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MAAPMLVPKFWKPGTEGPGVSISEERMSSAEASGTAVIYNRYASLSIEQQRQKLPIFKKI
NDVGIHLCDLESKDKRQTTCFQLSVDKGVLLLDEAHERTLYTDIAIGLLRKIQKKRGDLR
LIVSSATLDAEKFRSFFNMNETTDPSKDTCAILTVEGRTFPVDIFYTLSPVPDYVKATVD
TVTKIHQNEADGDILAFLTGQEEVEMVVSMVIEQARALSRSGMKKHLRVLPMYAGLPPGE
QMKVFERMSPNCRKIVVATNIAETSITINGIVFVIDCGFVKLRAYNPRTGIESLVVTPVS
QASAAQRAGRAGRNRSGKCFRLCTEETFEKLPESTVPEMQRSNLAPVILQLKALGIDNVL
RFHFLSPPPAQSMVQALELLYALGGLNDQCFLTDPLGLRMAEFPLNPMFAKMLLESGNFG
CSQEILSIAAMMQIQNVFLVPPNQKSAAVREHRKFAVAEGDHLTMLNVYEAFVKHNKNSQ
WCQKHFLNYKGLIRATTVREQLKKLLSKFRVPKKSSEGDPDPILRCIVSGFFANAAKFHY
SGFYRTIRDDYELHIHPTSVLYGEKEPQWVVYNEIIQTSKYFMRDVTAIQSSWLLELAPH
FYRRRTSISQRVKKARVT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccatgctagtgccgaagttttggaaaccaggtactgagggacctggagtg
agtatatccgaggagcgaatgagttctgcagaagcaagtggcactgcagtgatttacaat
cgatatgcatccctctccattgaacaacagaggcaaaagcttcctatctttaagaaaatc
aacgatgttggtattcacttatgtgacttggagtcaaaggacaaaagacaaactacctgc
ttccagctatctgtagacaaaggtgttctcctgttggatgaagcccatgagagaaccttg
tacacagacatagctattggcttattaagaaagatacagaagaagagaggtgatcttcga
cttattgtgtcctccgctacactagatgcagagaaatttcggagctttttcaatatgaat
gagaccaccgaccctagtaaggacacatgtgccatcctgactgtggagggacggacattt
ccagttgacatattttatactttaagtccagtccctgattatgtgaaagctacagtggac
acagtcacgaaaatccaccagaatgaggctgatggtgatatcctagcttttctcactggc
caggaggaagtggagatggtagtttccatggtgatagagcaggcccgtgctctttctcgc
agcgggatgaaaaagcacctccgtgttctcccaatgtatgcagggctgcctcctggcgaa
cagatgaaagtctttgaaagaatgtcccctaactgcaggaagatagtggtagccacaaac
attgcagaaacctcaatcactattaatgggattgtttttgtcatcgactgtggctttgtg
aagctgagagcctacaatcccagaacaggtatcgaatctctcgttgtaactccagtctcc
caggcatctgcagctcagcgagcagggcgagcaggccgaaatcgctcgggaaagtgcttc
agactatgcacagaggaaacctttgagaaactgccggaatccacagtgccagagatgcag
cgcagtaaccttgctccagtcatactccagctaaaagcactgggtattgacaatgtgctg
agattccattttctgtctcctccaccggcccagtcaatggtccaggcattggaactgctt
tatgccctaggaggtttgaacgatcagtgcttccttactgaccctcttggcttacgcatg
gctgaatttcccttgaatcccatgtttgctaaaatgctgctggagtcaggaaactttggg
tgctcacaggagattttgagtatagcagccatgatgcagatacagaatgtgtttctggta
cccccaaaccagaaaagtgcagcggtaagagagcacaggaagtttgctgtggctgaggga
gatcatctcacaatgctgaacgtctatgaggcctttgttaagcacaataaaaactctcag
tggtgccagaagcatttcttaaactacaaagggcttattagagccactaccgtacgtgag
caactaaaaaagttattgtccaaattcagagtgccaaagaaatcgagcgaaggtgaccca
gatcctattctgcgatgtattgtttcaggcttctttgcgaatgctgctaaatttcattat
tctggattctacaggaccattcgagatgattatgaacttcatattcatccaacctctgta
ttatatggagagaaggaaccacaatgggtcgtgtataacgagatcatccagacatccaag
tattttatgagagatgtgactgcgatccaatcttcgtggttgttagaattagccccgcac
ttctatcgaagaagaacttccatttctcagagggtaaagaaagctcgagttacctga
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