KEGG   Rhincodon typus (whale shark): 109912525
Entry
109912525         CDS       T06055                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rtp03041]
    109912525
Enzymes [BR:rtp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109912525
Spliceosome [BR:rtp03041]
 Complex C
  Other components
   Complex C specific factors
    109912525
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N Cas3-like_C_2
Other DBs
NCBI-GeneID: 109912525
NCBI-ProteinID: XP_048464496
LinkDB
Position
19:11895834..11949428
AA seq 618 aa
MAAPMLVPKFWKPGTEGPGVSISEERMSSAEASGTAVIYNRYASLSIEQQRQKLPIFKKI
NDVGIHLCDLESKDKRQTTCFQLSVDKGVLLLDEAHERTLYTDIAIGLLRKIQKKRGDLR
LIVSSATLDAEKFRSFFNMNETTDPSKDTCAILTVEGRTFPVDIFYTLSPVPDYVKATVD
TVTKIHQNEADGDILAFLTGQEEVEMVVSMVIEQARALSRSGMKKHLRVLPMYAGLPPGE
QMKVFERMSPNCRKIVVATNIAETSITINGIVFVIDCGFVKLRAYNPRTGIESLVVTPVS
QASAAQRAGRAGRNRSGKCFRLCTEETFEKLPESTVPEMQRSNLAPVILQLKALGIDNVL
RFHFLSPPPAQSMVQALELLYALGGLNDQCFLTDPLGLRMAEFPLNPMFAKMLLESGNFG
CSQEILSIAAMMQIQNVFLVPPNQKSAAVREHRKFAVAEGDHLTMLNVYEAFVKHNKNSQ
WCQKHFLNYKGLIRATTVREQLKKLLSKFRVPKKSSEGDPDPILRCIVSGFFANAAKFHY
SGFYRTIRDDYELHIHPTSVLYGEKEPQWVVYNEIIQTSKYFMRDVTAIQSSWLLELAPH
FYRRRTSISQRVKKARVT
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcggcccccatgctagtgccgaagttttggaaaccaggtactgagggacctggagtg
agtatatccgaggagcgaatgagttctgcagaagcaagtggcactgcagtgatttacaat
cgatatgcatccctctccattgaacaacagaggcaaaagcttcctatctttaagaaaatc
aacgatgttggtattcacttatgtgacttggagtcaaaggacaaaagacaaactacctgc
ttccagctatctgtagacaaaggtgttctcctgttggatgaagcccatgagagaaccttg
tacacagacatagctattggcttattaagaaagatacagaagaagagaggtgatcttcga
cttattgtgtcctccgctacactagatgcagagaaatttcggagctttttcaatatgaat
gagaccaccgaccctagtaaggacacatgtgccatcctgactgtggagggacggacattt
ccagttgacatattttatactttaagtccagtccctgattatgtgaaagctacagtggac
acagtcacgaaaatccaccagaatgaggctgatggtgatatcctagcttttctcactggc
caggaggaagtggagatggtagtttccatggtgatagagcaggcccgtgctctttctcgc
agcgggatgaaaaagcacctccgtgttctcccaatgtatgcagggctgcctcctggcgaa
cagatgaaagtctttgaaagaatgtcccctaactgcaggaagatagtggtagccacaaac
attgcagaaacctcaatcactattaatgggattgtttttgtcatcgactgtggctttgtg
aagctgagagcctacaatcccagaacaggtatcgaatctctcgttgtaactccagtctcc
caggcatctgcagctcagcgagcagggcgagcaggccgaaatcgctcgggaaagtgcttc
agactatgcacagaggaaacctttgagaaactgccggaatccacagtgccagagatgcag
cgcagtaaccttgctccagtcatactccagctaaaagcactgggtattgacaatgtgctg
agattccattttctgtctcctccaccggcccagtcaatggtccaggcattggaactgctt
tatgccctaggaggtttgaacgatcagtgcttccttactgaccctcttggcttacgcatg
gctgaatttcccttgaatcccatgtttgctaaaatgctgctggagtcaggaaactttggg
tgctcacaggagattttgagtatagcagccatgatgcagatacagaatgtgtttctggta
cccccaaaccagaaaagtgcagcggtaagagagcacaggaagtttgctgtggctgaggga
gatcatctcacaatgctgaacgtctatgaggcctttgttaagcacaataaaaactctcag
tggtgccagaagcatttcttaaactacaaagggcttattagagccactaccgtacgtgag
caactaaaaaagttattgtccaaattcagagtgccaaagaaatcgagcgaaggtgaccca
gatcctattctgcgatgtattgtttcaggcttctttgcgaatgctgctaaatttcattat
tctggattctacaggaccattcgagatgattatgaacttcatattcatccaacctctgta
ttatatggagagaaggaaccacaatgggtcgtgtataacgagatcatccagacatccaag
tattttatgagagatgtgactgcgatccaatcttcgtggttgttagaattagccccgcac
ttctatcgaagaagaacttccatttctcagagggtaaagaaagctcgagttacctga

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