Rhincodon typus (whale shark): 109912542
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Entry
109912542 CDS
T06055
Symbol
rubcnl
Name
(RefSeq) protein associated with UVRAG as autophagy enhancer isoform X1
KO
K25948
protein associated with UVRAG as autophagy enhancer
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109912542 (rubcnl)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Other autophagy associated proteins
Others
109912542 (rubcnl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
SAND
Motif
Other DBs
NCBI-GeneID:
109912542
NCBI-ProteinID:
XP_048458843
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Position
11:69738717..69804253
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AA seq
693 aa
AA seq
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MKQARESNLSPVSKAKTVSASGFHLNTLCLPLQSPFTSVQSDEYSTPAVMGQSAVHPGRH
SNNPEAIKEILISALGTFDGFKPPSTENCAAVTRLSSLTELQDGASKCLWDNHHDKGGEE
QRHRVEIAMTTSQDGSYSSSSSVSPEKSSSRVKFNPLSKLLTSVQATASRYRSFSGAPPA
VCKAEVSYYQCPQSDSRIHPEKARYWPNDRPETIVYTSYLSSPSFSASRAQERENTHLVV
ADMVIAALENVKSNMYEQAELLEDCSLAIAQTPVDEISTYIKKAVHSNSVNSVDSGYECG
SATQLDDCSDAGSKSLLEDKQNGDAVGADDDAYDDFVIIGTGVRTDQEFDDLIFGSDGPL
KSIERHRLSAEYLARRLFKSFRMTWLPPETEMHHFDTVEKVLDEFLPLKDTLPGAEESVD
LTPEFKLNSRLRGTADWAPPRFQILFFIHAPQRRETVVAAQNSMCAGCGTPIEHKYIKKL
RYCDYLGKYFCECCHHNEESPIPGRILMKWDFSKHPVCHFSKQLLESIWHDPLFNIFYIN
KFLYSKVKELRKAKEIQEQLIHIKKLLRTCRLAESALIEFCRIRSHLTEELHLYSLNDLL
MVKQGLLVSGLKDALKNVLAHVESCELCLAKGFFCEFCKSRDILFPFQTDQCRRCGECKA
CFHKECFKTEQCPKCIRIRARKELLLAFQQPAS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggcaagggagagcaatttatcgcctgtgtccaaggcaaagactgtgtctgct
tcaggattccacctgaacaccttgtgtttgccgcttcagtcaccgtttacctcagtacaa
tcagatgaatactccacaccagcagtgatgggccagtctgcagtgcatcccggacgacac
tcgaacaatccagaagccatcaaagagatcctgatctcagcactgggcacctttgatggc
ttcaaacctccttccacagagaactgtgcggctgttacaaggctttcttcactgaccgag
cttcaagatggagcttcgaagtgtctttgggacaaccatcatgataaaggtggtgaagaa
cagcgacaccgtgttgagattgctatgacgacctcccaagatggctcgtacagcagtagt
tcaagtgtctctcctgaaaagtcctcaagtcgcgttaaatttaaccccctcagcaaactc
ctaacctccgtacaggctacagcttccagatacaggagcttctcgggagctccacctgca
gtgtgtaaggctgaggtatcctattaccaatgccctcagtctgactccagaatccatcca
gagaaagcacggtattggccaaatgacagaccggagaccattgtgtacacgagttatctc
tccagtcccagtttcagcgcaagtagggctcaggaaagggagaacactcacctggttgtt
gctgatatggtgattgctgcactggagaatgtgaaaagtaatatgtacgaacaggcagag
ctgctggaagactgtagcttggcaattgcacagaccccagtagatgagataagcacttat
attaagaaggcagtccattccaactccgtgaattctgtggatagcggttatgaatgtggt
tctgctacccagttggatgattgctctgatgctggctccaagtctctgcttgaagacaaa
caaaatggtgacgctgttggtgctgatgacgatgcttatgatgattttgtgataataggt
accggtgtcagaacggatcaagaatttgatgaccttatttttggttccgatggcccctta
aaatcgatagaaaggcaccgtttatctgctgaatatttggctcgccgactgtttaaatct
ttcagaatgacctggttgcccccagagactgaaatgcatcattttgacacagtggagaaa
gtgctggatgaatttctccctctgaaggacactttgcctggtgcagaggaatctgtagat
ttgacaccagagttcaagttaaattcccgattgaggggaactgcagattgggccccacct
cgctttcaaattctgttcttcatccatgcaccacaaaggagagaaactgttgtagctgct
cagaattccatgtgtgctggttgtggaactccaattgagcacaaatacatcaaaaagctc
cgttactgtgactacttgggaaagtatttctgtgagtgctgtcaccataatgaggaatcc
ccaatccctggccgaattctaatgaagtgggatttcagtaagcatccggtttgccatttc
tccaaacaactgctggaaagtatatggcatgacccactgttcaacatcttctacatcaac
aagttcctctacagcaaagtaaaggaattgagaaaagccaaggaaattcaagaacagttg
atacacatcaaaaagctgctaagaacctgcagattggctgaaagcgccctgatcgagttc
tgtcggatacgttcccacctgactgaggagctacacctttattcattgaatgatctgctg
atggtgaagcaaggtctgctggtttcaggcctgaaagatgccctcaagaatgtcctcgct
cacgtggaaagttgtgagttgtgtctggccaagggcttcttctgtgagttttgcaagagt
agagatattctcttcccctttcagacagaccaatgcagacgatgtggcgaatgcaaagcg
tgctttcataaagagtgcttcaaaactgaacaatgtccaaagtgtataaggattcgtgca
cggaaagaactactgcttgctttccagcagccagcaagctaa
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