Rhincodon typus (whale shark): 109912553
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Entry
109912553 CDS
T06055
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04115
p53 signaling pathway
rtp04120
Ubiquitin mediated proteolysis
rtp04137
Mitophagy - animal
rtp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109912553 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109912553 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109912553 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
109912553 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109912553 (siah1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109912553 (siah1)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
109912553 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
109912553
NCBI-ProteinID:
XP_020367574
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All DBs
Position
15:complement(35377734..35394541)
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AA seq
282 aa
AA seq
DB search
MSRQTATALPTGTSKCTPAQRVPALAGTTASNSDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcagactgccacagcactccctactggtacatcaaaatgcactcctgcccaa
agagtcccagcattggcaggaactacagcctccaatagtgatttagcaagtctttttgag
tgtccagtctgctttgactatgtactgccaccaattcttcagtgccagagtggccatctt
gtctgcagtaactgccgtcctaagcttacatgctgccccacttgccggggcccgttgggt
tccattcgcaatctggcaatggaaaaagtggccaactctgtactgtttccttgtaaatat
gcctcttcaggttgtgagataacactgccacatacagagaaagcagaccatgaggaactc
tgtgagttcaggccatactcatgtccttgccctggtgcttcttgtaaatggcagggttct
ctggatgctgtaatgccacatctgatgcatcaacacaagtccattacaaccttgcagggt
gaggacatagttttcctggccacagacattaaccttccaggtgcagtagattgggttatg
atgcaatcttgttttggctttcatttcatgttggtcttagaaaaacaagaaaagtatgat
ggccaccaacaattttttgccatagtacaactaattggaacacgcaagcaagctgaaaac
tttgcgtatagacttgaactcaatggccacagacgacgactgacttgggaagcaactcct
cgctccattcatgagggtattgctacagcaattatgaatagtgactgtctggtatttgac
actagcattgcacagctttttgcagaaaatggaaacttgggaattaatgttacaatctcg
atgtgctga
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