Rhincodon typus (whale shark): 109912641
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Entry
109912641 CDS
T06055
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109912641 (trim59)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109912641 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-C3HC4_3
CorA
Phosphoesterase
zf-RING_6
CsgA
zf-RING_11
ALAD
CobA_CobO_BtuR
DUF1818
Motif
Other DBs
NCBI-GeneID:
109912641
NCBI-ProteinID:
XP_020367660
LinkDB
All DBs
Position
13:46663805..46683415
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AA seq
286 aa
AA seq
DB search
MDHFEEDLTCSVCYSIFEDPRVLPCSHTFCRTCLENIVHESGNLSIWRHLRIPLKCPTCR
SIVELPPVGISSLPINFSLMGIIEKYQKEEHPNTPTCTEHFRQPLNMFCLLDRKLVCGYC
LTVGHHQGHPIDDLQNAYIKEKETCSKLIEQLTEKHWAKISIFIEQLEHQKSQMEQTIQQ
EEEIVIQYFENLQKIVESKKRAFLVTFDEVNVRITSEYVPLIQKMQNLKEEQHDLLTSST
YLEDEKDPLIFLEKVHIYRQRVNNLMKTQLPFIRPLNIQPRAGQFL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaggaagacctaacatgttctgtatgctactccatctttgaagaccct
cgtgtattgccttgttctcacactttttgccgaacctgtttggaaaacattgttcatgaa
tcaggaaatttgtccatttggcgacatcttcgaatcccactaaaatgtcctacttgtaga
agtattgtggaacttcccccagtgggcataagctcattaccaataaacttttcactgatg
ggaattattgagaaataccagaaagaggaacatccaaacactccaacctgcacagagcac
ttcaggcaacctttaaacatgttctgtttgttggaccgtaaattggtatgcggttattgc
ttgacagtgggccatcatcaaggccatcccattgatgatctccagaatgcttatattaaa
gaaaaggaaacatgtagcaaacttattgaacaactgactgaaaaacactgggccaaaata
tcgattttcattgaacaactggaacatcagaaatcacaaatggaacaaaccattcaacaa
gaagaagaaatcgtcatccagtattttgagaatctgcaaaaaatagtggaaagcaaaaaa
cgagcttttctggttacttttgatgaggtcaacgtaagaattaccagtgagtatgttcca
ttaattcagaaaatgcaaaatctaaaggaagaacaacatgaccttctaacatctagtacg
tacttggaagatgaaaaggatcctttgattttccttgagaaagttcatatctaccgtcag
agggtgaataatttaatgaaaacccagcttccttttattcggccattgaatatacaacca
cgagcaggacaatttctg
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