Rhincodon typus (whale shark): 109912853
Help
Entry
109912853 CDS
T06055
Symbol
znrf3
Name
(RefSeq) E3 ubiquitin-protein ligase znrf3 isoform X1
KO
K16273
E3 ubiquitin-protein ligase ZNRF3 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109912853 (znrf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109912853 (znrf3)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109912853 (znrf3)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109912853 (znrf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
109912853
NCBI-ProteinID:
XP_048467578
LinkDB
All DBs
Position
24:complement(12178996..12403812)
Genome browser
AA seq
887 aa
AA seq
DB search
MMLMGAEGLLLGVLLAVLGSLCAKETAFVEVVLFESSPNGEYTTFTTDLQGRFSRAGATI
SAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGAT
AVIFDVSENPDAIDQLNQGSEDPLKRPVVYVKGVDAVRLMNIVNKQKVARARIQHRPPRQ
PTEYFDMGIFLAFFVVVSLVCLVLLIKIKLKQRRSQSSMNRMAVQALEKMETRKFKSKCK
APREGSCAASDTLSSSSTSDCAICLERYVDGEELRVIPCTHRFHKKCVDPWLLQHHTCPH
CRHNIIERKKESNGPVCVEAESQGRSRQRVVLPVHYPGRVHRASQLTTYPTRTSMDPRGN
PVTVLTVDQHSDQGLYPAAQSSSYVRSYPPIHSLGAHHCNLEHRAYSQAHGFRRPKFSGR
SYSRAACFSQYETMYQHYYIQGLSYPQSESQAGIVNHKGPSRAFQSSGSMLYPTVVHIPP
SSQLDAGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSRQCHCSSSDSMLDCTEVSNQG
VYGSCSTFRSSLSSDYDPYVYRSRSPCQAPDSGSGRGGHPLTPGPQEDELPAYLCPSPGG
ESRLLQAPSPGDQLSNCSMDMNYSSDSSLEYRESNTSTSEGRPDCSSGSTADSVQSWSGP
ELPGAAAPQQACACCFGETHPLDCKGADDQRAEGHSFSLLSGKRCDECGRSTDPCTTSQS
LYSVHAGPSCRTETGNYEGLPCCFYEEKRARRGSCLAEDYSVSVQYTLASESLHDCYPAS
SSSSSTTNLPGLCELSQRIPIIPEDTDGDSATPQDCEATRLCRPGAVPSEPEREQRASLP
PLTGLPDQEGAFQNICSGLHESTMRGQSAGSRPCLILQKDSSSEQDI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgatgggtgctgagggattgctgctgggagtgttgctagccgtgctgggctcg
ctttgtgccaaggagactgcttttgtggaagtggtgctgttcgagtccagtcccaatggg
gaatatacaactttcacaaccgacttgcaaggacgtttctcccgggcaggagcaaccatc
agcgccgagggagagattgtgcagatgcacccgttgggactatgcaacaacaatgatgag
gaggacctatatgaatacggatgggtaggagtggtgaagctggaacaaccagaactggat
cccaaaccctgtctcactgtgcttggcaaggctaagcgggcagtccagagaggggcgaca
gctgtcatctttgatgtatctgaaaatccagatgccattgaccagttgaatcaaggctct
gaagacccactgaaacggccagtggtttatgtcaaaggtgtcgatgcagtgagattgatg
aacatcgttaacaagcagaaagtggcacgagcacgaatccaacatcgaccaccacggcag
cccacagaatactttgacatggggattttcctggctttctttgtggttgtgtctctggtc
tgtctggttctactcattaaaatcaaactcaagcaacgcaggagtcagagctcaatgaat
agaatggcagttcaagccctggagaagatggagacaagaaaattcaaatcaaagtgcaaa
gctcctcgagaaggcagctgtgctgcttcagatacactcagtagtagttccacatcagac
tgcgcgatctgcctggagagatatgtcgatggagaggagctgcgtgtcattccatgcaca
catcggtttcacaagaaatgtgtggacccctggctcctccagcaccatacctgtccacac
tgcaggcacaacatcatcgagcgaaaaaaggagagcaacgggcccgtctgtgtggaggcc
gagagccaaggccgcagcaggcagcgtgtcgtgcttcccgtccactaccctgggcgtgtt
cacagggcgagccagctgaccacataccccaccaggaccagcatggacccgcgtgggaac
ccagtcactgtgctaacagtggaccagcacagcgaccagggcctgtaccccgctgcacag
tcaagctcctatgtcaggagttacccgcccatccacagcctgggcgctcaccattgtaac
ttggaacatcgggcctactctcaggcccacggcttcaggaggccgaaatttagtgggcgg
agctactcaagggctgcttgcttttcccagtacgaaaccatgtatcaacattattacatc
caaggactcagttatccccagtcggaatctcaggcagggatcgtcaatcacaaggggccc
tcccgtgccttccagtccagtgggagcatgctgtatcccactgtggttcacatcccaccg
tcctcccagctggatgcaggcagcacttcaagcttcagctgttaccacggtcaccgatcg
gtctgcagcggttacctagcagactgcccgggcagtgatagcagtagcagtagctcgagg
cagtgccactgctcctccagcgactccatgttggactgcaccgaggtcagcaaccagggt
gtctatggaagctgctcaaccttccgcagctccctgagcagcgactacgacccctacgtc
tatcggagccgcagcccctgccaggccccggactcgggttcgggcaggggagggcacccc
ctgaccccgggccctcaggaggacgagctgccggcctacctctgcccctcgcccggcggt
gaaagcaggctgctccaggccccgtcgccaggagaccagctgtccaactgcagcatggac
atgaactacagcagcgattcctcactggagtacagggagtcgaacacttctacctcagaa
ggtaggcccgactgctcctcagggtctactgcggacagcgtgcagagctggagtgggcca
gagttacccggggcggctgcccctcagcaggcctgtgcttgttgctttggtgaaacccat
cctctggactgcaagggggccgacgaccagcgagcggagggtcacagcttctcgctgctg
agtgggaagcgctgtgacgagtgcgggaggagcactgatccgtgtaccacgtcgcagagt
ttgtacagtgttcatgcaggcccctcgtgccggaccgagacgggcaattacgagggcctg
ccctgctgtttctacgaggagaagcgggcgcgccgcggcagctgtttggccgaggactac
tctgtgagcgtgcagtacaccctggccagcgaatcgctgcacgactgctacccggcctcc
tcctcctcctcctccaccaccaacctccccggcctctgcgagctgagccagcgcattccc
ataatccccgaggacacggacggtgactcggccacgcctcaggattgcgaggccaccagg
ctctgcaggccgggggccgtgccttcggagccagagcgtgagcaaagagccagcctgccc
cctctcacagggcttcctgaccaagagggcgccttccagaacatttgctctgggctgcat
gaatccaccatgagaggtcagtcagcaggatctagaccatgcctaattttgcaaaaggac
tcttccagtgagcaggacatctga
DBGET
integrated database retrieval system
