Rhincodon typus (whale shark): 109912904
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Entry
109912904 CDS
T06055
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4a
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
rtp04144
Endocytosis
rtp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109912904 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109912904 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
109912904 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109912904 (nedd4a)
04121 Ubiquitin system [BR:
rtp04121
]
109912904 (nedd4a)
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109912904 (nedd4a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109912904 (nedd4a)
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109912904 (nedd4a)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
HECT type E3
109912904 (nedd4a)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
109912904 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
109912904
NCBI-ProteinID:
XP_048471874
LinkDB
All DBs
Position
33:complement(15012626..15125806)
Genome browser
AA seq
759 aa
AA seq
DB search
MTYLPKSNASEEDSTEQADELEPGWELLDQQSVTVHSQPPPALPVGWEEKQDNLGRTYFV
NHETRTTQWIRPSSQDTASDINRCRNNIQLEAQHVYSTRRQISEEIETSENNRDSPDSWE
IITDDETVFSNCNPQSPPPPHTPTGQNTSFDLQNQLAEELSRRFQASGCTVTDRRSSCSS
HSSRRGSSQATMDEQPALPVILPTSTGLPPGWEVKKDDKGRAYYVNHNNRTTSWTRPVMQ
TTSEAVQPKPCRSPTAYLPPTVSPQDSPQNSPSHQRKYDLGFLPPGWEVRHATNGRHFFI
DHNTKTTTWEDPRLKIPAHLRHRPSLDPSDLGPLPPGWEERVHSDGRIFYIDHNSKATQW
EDPRLQNVAITGPAVPYSRDYKQKYDYFRKKLRKPSDGPNRFEMKLRRNAILEDSYRKIM
SVKRVEFLKARLWIEFDAEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQIN
PNSGLCNEEHLSYFKFIGRVAGMAVYHGKLLDGFFIRPLYKMMLQKPITLQDMESVDSEY
YNSLMWILENDPTDLDLRFVVDEELFGQTQQHELKPGGSEILVTNKNKKEYIHLVMQWRF
VNRIQEQMNSFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYNAN
HPVIQWFWKTVLLMDSEKRIRFLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPEKL
PRAHTCFNRLDLPPYESFEELREKLNLAVENTEGFDGVD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacctatttgcctaagagtaatgcttccgaagaagatagcacggagcaggctgatgaa
ttggagcctggctgggaacttctggaccaacagagtgtgactgtccatagccaacccccc
cctgcactacctgttggatgggaggagaagcaggataatctgggaagaacttactttgtc
aaccacgaaaccagaacaacacagtggattcgaccaagttctcaggacacggcatcagac
ataaatcgttgtcgaaataacatccagctggaagcacagcatgtatatagtacacggaga
cagatatcagaagaaatcgaaacttctgaaaacaacagagattccccagatagctgggaa
attataactgatgatgaaactgtgttcagtaactgcaaccctcagtcacccccacctccc
cacacacctacgggacaaaatacaagttttgacttgcaaaatcaactagcagaggaactt
agtcggcgctttcaggcatctggatgcacggttacagatcgtcgcagctcctgctcaagt
cattccagtagacggggaagttcacaagctactatggatgaacagccagcactgccagtt
attttacccacttcaacaggattgccccctggctgggaagtaaagaaggatgacaaggga
agagcctactatgtcaaccacaataaccgaaccaccagttggacgcgacctgttatgcag
accactagtgaagcagtgcaaccaaaaccctgtcggagtcccacagcatatcttcctcct
acagtatctcctcaagattctccacaaaattccccaagccatcaacggaaatatgatttg
ggctttctccctccaggctgggaagtccgacatgcaaccaatggtagacatttcttcatt
gatcacaacaccaaaacaacaacatgggaggacccaagattgaaaattccagctcattta
agacaccgaccatctttagatccttcagaccttgggccacttcctcctggctgggaggag
agggttcactcggatggtagaattttctacattgaccataattctaaagctacccagtgg
gaggatcctcgcttacagaatgtagccatcactggacctgctgtgccttactcaagagat
tacaaacagaagtatgattatttcaggaaaaagctgaggaagccttctgacggtccaaat
cggtttgaaatgaagctacgccgtaatgcaatcttggaagattcctacagaaaaataatg
tctgtgaagagggtggaattccttaaagccagactatggattgagtttgatgctgaaaaa
ggattggattatggtggtgttgccagggaatggttttttcttctctccaaggagatgttc
aatccttattatggattgtttgaatattctgccacggacaattacaccttacagataaat
ccaaactccggactctgcaatgaggagcatctatcttacttcaagttcataggccgcgta
gctggaatggcagtttaccatggaaaattattagatggatttttcatcagaccgttgtat
aagatgatgcttcagaagccaattacactgcaagatatggagtcggtggacagtgagtat
tacaattcgctaatgtggattcttgaaaatgatccaactgatttggatcttcgattcgtg
gttgatgaagagctttttggtcagactcaacaacatgaactaaaacctggtggatcagaa
atattggttaccaacaaaaacaagaaagaatacattcaccttgtgatgcagtggaggttt
gtcaatcgcatccaggaacaaatgaattcttttaaggagggtttttttgaactgatccca
caagatctcataaaaatattcgatgagaatgaattggagctattaatgtgtggactgggg
gatgtagatgtgaacgactggagggagaacacaaagtacaaaaatggatacaatgcaaac
catcctgtcattcaatggttttggaagacagtgctgttaatggattcagaaaagcgtatt
cgattcctgcagtttgtgactggtacctcacgggtacctatgaatggatttgctgaactg
tacggatcaaatggaccacagttatttactattgaacagtggggaactccagagaaatta
ccaagagcacacacgtgtttcaatcgtcttgatctgccaccttatgagtcatttgaagag
ttgcgggagaagcttaacctggcagtcgagaacactgaaggttttgatggagtcgattga
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