Rhincodon typus (whale shark): 109912948
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Entry
109912948 CDS
T06055
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
Organism
rtp
Rhincodon typus (whale shark)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
NPP
Motif
Other DBs
NCBI-GeneID:
109912948
NCBI-ProteinID:
XP_048468558
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All DBs
Position
1:174278189..174353399
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AA seq
1381 aa
AA seq
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MLCWEQSRCRQVGSEIHMDGVLPQVSPLNEIFRDDEVQQICCRARFTVYLLKNGRVYILF
NEQRKRARPELINGLEELKIHCMDSGTAHILYVSEGGDVFFSKLQNKKHRSFMKPFKITE
PQLLRSLAGKCVIQVACGNNHSLVLCKDGQVFAWGQNTGGQLGLGRSGHCVLSPQRVESL
TAIPMAQITAGGAHSFALSLSGAVYSWGRNNHGQLGLDDTKSRKLPTYVKLLECKKIVYI
SCGAQHTALLTKDGSVFTCGAGSYGQLGHSTRSDEIKPRLVTELLGSEVSQIACGSYHTL
VLVASSGKIYYYGGIENRQTGNEKHSHRMVPSPITFLISIPHGTEQIHVTMSHSASEFTS
AHTRRMTRAAANRVDRHKRTIITPYLVRATSTPAKQRRINGKERTTPKLTTQPLPSGTRA
EHETKANRKRQHGSQLRKAQVPSRQELAKSSAAIDTNSSIQDCIMQPTVKRIFAGANQGF
ALCGVEVDSVSPEVECPFLTLKRIATVEDSLLDKWSATDDEELWENTKKEIDLIFSSAAS
LNGSFLEISNDDHFKTGLASSGVDMSAMSVWFEKLGKNPRLLQEVTNAVQTNLIPSLSTS
PIGVEALRIYLVLPELLDVLTEQSNIVMLSSLLSSATASLEGSQLEILESWWSHLNEFFF
KKLVTMYRGASYRLLQETSSSQREFPDKLCNCLNILQRLYKINSSVGFQIQENSFYIAPA
EVFRETPISCDIGASTWERRCCSTGTVFTWTPLRLVFWQVMQLGHLRKNNTANSLISLLK
LIPYSCIFNMETKIQIFKRISHLKIRGEKVTDEKIIFGYKAIYDSLIQDSNYSSLEICPS
TGNTETSNGNIGASTGNTNVCHDNVDISTSITDASTAYTEPSYSNIDTSITNVDASARIV
DVSTEMIIDASVGNTGAPNNNIETSTGNVDAPAEIAGTSTRNTDAPNDNLDASTGTTDAL
TGRNVGDFTGVIESTRNTGVPNESNDASFVDTQTINLDEISNQDQVNFVFDDYDDYDDYD
DYCGSPLFINEVDILNCRRILNNLLNFPDTGCHLEIDRTQILQSTLAQLRSCDEIRLRDF
FQVTFKGEPAIDQGGVSKEFFSIITEELCTQPKIFKSFEESRLVWFPEWDPEIIDVFHLV
GILCWLALYHGFVADFHFPLALYKKLLNVQPTLNDLKELSPTLGRKPVGREMVDGSVTEH
ELIPNGKNIPVTKQNRKQFVDSYIDYVFNTSVEKHFKAFAKGFRRACPLPAVDIFLPVEL
MAVIHGNTNYDWHQLEKNTKYHGYVEADKSIANFWEMFHGLTEEAKKHFLAFLTGCDRIP
VGGMRNLSITIVHVPKDDPDLYFPAAHTCNMILDLPKYSSMEILKERFLRAIGCCRKFGI
Q
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctgggagcagtcaagatgcagacaagtgggatcagaaatccacatggatggg
gtactaccacaagttagccctttgaatgaaatcttcagggatgatgaagttcagcagatc
tgctgcagagctcgattcactgtgtatttattgaaaaatggcagagtttacattttattt
aatgagcagaggaaaagagcacggccagagctgattaatgggttggaagagctgaagatt
cactgcatggacagtggaacagcacacattctctatgtttctgaaggaggggatgtgttt
ttcagcaaactacaaaacaagaagcacagaagtttcatgaaacctttcaaaatcacagag
ccacagctactgagaagcttagcaggaaagtgtgttattcaggttgcctgtggaaacaat
cactcattggttctgtgcaaagatggtcaagtctttgcatggggacagaacactgggggc
cagttgggccttggcaggagtggtcactgtgtgctcagcccccaacgtgtggaatcactg
acggcaatccctatggctcagattacagcaggtggagctcacagctttgcgctctccctc
tctggggcagtgtacagctggggaagaaataaccatggacagctggggctcgatgacaca
aaatctcggaaacttcccacgtacgtaaagctattggaatgtaagaagatcgtctacatt
tcctgtggagcgcaacacactgccctgcttactaaggatgggtctgtttttacctgcggg
gctgggagctatggacagcttggacacagcacaagaagtgatgagattaaaccacggttg
gttactgagctacttgggagtgaagtctctcagattgcatgtgggagctatcacacgttg
gtcttagtggcgtcatctggcaaaatctactattatggtggtatcgagaacagacaaaca
ggaaatgaaaaacacagtcatcggatggtgcccagtcctattacgttcttaatcagtata
cctcatggcacagaacagattcacgtgacaatgagtcattctgcttcggaattcacctcg
gcacacaccaggagaatgacaagagcagctgcaaacagagtcgataggcacaagcggaca
attatcacaccatacttggtccgtgcaaccagcacaccagccaaacagcggaggatcaat
ggcaaagagcgaacgacgccaaagttaaccacacaaccgcttcccagtggaaccagggct
gagcacgaaaccaaagcaaacaggaaacgtcagcacggcagccaactccgaaaggcccag
gttccatcgagacaagagctggcaaagtcatcggcagccattgatacaaactccagtatt
caagattgtataatgcagccaacagtcaaaaggatctttgcaggagctaaccaaggattt
gcattgtgcggtgttgaagtggattcagtttctcctgaagttgaatgtccattcctcact
ctgaagagaattgctactgttgaagattctcttctggacaaatggagtgcaacagatgat
gaggaactgtgggaaaacacaaagaaggaaattgatcttatcttttcttctgctgcatcc
ctgaatggaagttttctggaaataagcaacgatgatcatttcaaaacaggcctagcatcg
tcaggagttgacatgtcagcaatgagcgtatggtttgagaaactggggaaaaatccaaga
cttttacaagaggtaaccaatgcagttcagacaaatttgattccatcgctctccacatct
cctattggtgtggaagctcttcgcatttatctggttttgcctgaactccttgatgttctg
actgagcagagcaacattgtgatgctttcaagtcttttgagctcagccactgcatcactt
gagggaagccaactggaaatccttgaatcttggtggagtcacctcaatgaatttttcttc
aagaaacttgtgacaatgtatcgaggtgcatcttacagacttcttcaagagacttccagc
agccaaagggaatttcctgataaactgtgcaattgtctcaatattttgcaaagactttac
aagataaattcctcagtgggttttcaaatccaggagaacagtttctacattgctcctgca
gaggtcttcagggaaactcctatttcctgtgacattggtgccagtacctgggaaagacga
tgctgttccactggaacagtcttcacctggactccactaagactcgtgttctggcaagtt
atgcaactggggcatttgagaaagaacaatacagcgaactcactgatatcattactgaaa
ttaattccctactcctgcatttttaatatggaaacaaaaattcagattttcaaaaggatc
tcgcacctgaaaattcggggagaaaaagtcactgatgaaaagattatttttggctataag
gcaatctatgatagccttattcaggatagcaattattctagtctggaaatttgtccttcc
actgggaacaccgaaacgtccaatgggaacattggtgcttctactgggaatactaatgtc
tgtcatgacaatgttgatatctctacaagcatcactgatgcctctactgcgtacactgag
ccatcttatagcaatattgatacatcgataacaaacgttgatgcctctgctaggatagtt
gatgtctctacagagatgatcattgatgcctctgttggaaacactggtgcacctaacaac
aatattgaaacctctacagggaatgttgatgctcctgctgagatcgctggtacctctacc
agaaacactgatgcacctaatgacaatcttgatgcttctacagggaccactgatgcattg
actgggaggaatgttggtgacttcactggggtcattgaatctaccaggaacactggtgtc
ccaaatgaaagcaatgatgcctcctttgttgacactcaaaccatcaacttggatgagatt
tcaaatcaagaccaggtcaactttgtatttgatgactatgatgattatgatgactatgat
gattattgtggttctcctctgttcattaatgaagttgatatcttaaattgccgccgcata
ttgaacaatttacttaatttccctgacactggatgccatctagaaatcgacagaacacag
atccttcaaagcacattagcacaattaagaagctgtgatgaaattagacttcgtgatttc
ttccaggtcacgtttaagggtgaaccagctattgaccaaggtggtgtgtcaaaggagttc
ttttccattattaccgaggagctgtgtactcaaccaaaaatattcaagtcttttgaggaa
tccaggcttgtttggtttccagaatgggaccctgaaatcattgatgtctttcacttggtg
ggaatcctctgctggcttgctctataccatggctttgtggcagattttcactttccattg
gctctctacaagaagctgcttaatgtccaaccaactttgaatgacctgaaagaactctcg
ccaactttaggccgcaagcctgtagggagagaaatggttgatggatcagttactgaacat
gaacttattcccaatggtaaaaacattcctgtaacaaaacagaacagaaagcagtttgtt
gattcctacatcgactatgtgtttaacacatcagtagagaaacactttaaagcctttgca
aaaggatttcgaagggcttgcccactgccggctgtcgatatttttctgccagttgagctg
atggctgtgattcatggaaacaccaattatgactggcatcagctggagaaaaacacaaag
taccatggatacgtggaggctgacaaatccattgcaaatttttgggagatgtttcacgga
ctgacagaggaagcaaagaaacattttctcgccttcctaacaggatgtgacaggattcca
gttggtggcatgaggaacctcagcattactatcgtgcatgtcccaaaggatgatcccgat
ttgtacttcccagctgcccacacctgtaacatgatcttggatctgcccaagtacagcagt
atggaaattctgaaggagagattcctgcgtgcaattggatgctgtagaaaatttggcata
cagtaa
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