Rhincodon typus (whale shark): 109912953
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Entry
109912953 CDS
T06055
Symbol
pax5
Name
(RefSeq) paired box protein Pax-5 isoform X1
KO
K09383
paired box protein 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109912953 (pax5)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109912953 (pax5)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Homeodomain
Motif
Other DBs
NCBI-GeneID:
109912953
NCBI-ProteinID:
XP_048450870
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Position
3:complement(2905749..3110614)
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AA seq
388 aa
AA seq
DB search
MEKNSSALRSVRSGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSH
GCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAER
VCDNDTVPSVSSINRIIRTKVQQPPNQQSPVTSHTIAPSTVAVTPVPSAATDPAGSSYSI
SGILGITPSSAENNKRKRDEGAQENPMQNGHSHPSRDFLRKQMRGELFTQQQLEVLDRVF
ERQHYSDIFTTTEQIKSEQSADYSTMASLAGGLEDMKSSLTNSADIGTSVPGPQSYPIIT
GRDLASTTLPGYPPHVPPAAQGSYPAPTLTGMVPGGDFSGSPYSHPQYTTYNDSWRFPNA
GLLSSPYYYSTATRGSAPATAAATYDRH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatagcagcgcgctcaggagtgtccgatcagggcacggcggagtgaatcag
ctcggaggggtctttgtcaatggtcgccctctccccgatgttgtccggcagcggattgtc
gagctggcccatcaaggggtgagaccctgtgacatctccaggcagctccgggtgagccac
ggctgcgtcagcaagattctgggcaggtattatgagactggaagcattaagccaggagta
attggaggatccaaaccaaaggtcgctacacccaaagtggtagataaaatcgccgactat
aagcgccaaaaccccaccatgtttgcctgggagattcgagatagactgttggcagagaga
gtctgtgacaatgatacagtgcctagtgtcagttctattaacaggattattcgaacaaag
gtgcagcagcctccaaaccagcaatcgccagtgacgtcccatactatagcaccaagcaca
gtggcagtgactcctgttccatctgctgccactgaccctgcgggatcttcctactctatc
agtggcattctgggaatcacaccttccagtgctgagaataacaagagaaaacgcgatgaa
ggtgctcaggaaaaccccatgcagaacggacactcccatccgagccgggattttctgcgg
aaacagatgaggggtgaactcttcacacagcagcagttagaagtgttagacagagtcttt
gaaagacagcactattcagacatcttcacaaccacagaacagatcaaatcagagcagagt
gcagattattccaccatggcgtcactggctgggggactggaagatatgaaatcgagtcta
acaaattcagctgacatagggaccagtgtccctggacctcagtcttaccccattataaca
ggtcgcgatttggccagcacgactcttcctggctaccctccgcatgtgccccctgctgct
cagggcagttatccagccccaacactgacaggaatggtgcccggaggtgatttttctggg
agtccatattcccatccacagtatacgacttataacgactcctggagatttcccaatgct
ggattattaagttctccctattattacagcacagcaacccgagggtcagcaccagcaact
gctgcagcaacctacgatcgtcactag
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