Rhincodon typus (whale shark): 109912976
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Entry
109912976 CDS
T06055
Symbol
emc1
Name
(RefSeq) ER membrane protein complex subunit 1
KO
K23562
ER membrane protein complex subunit 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109912976 (emc1)
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
109912976 (emc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
PQQ
Motif
Other DBs
NCBI-GeneID:
109912976
NCBI-ProteinID:
XP_020368023
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Position
31:18474798..18498732
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AA seq
991 aa
AA seq
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MLEDQTFASMLGFWRTVLSVHSGTLEDRAVMVVLSEIWLLFALFEFSAAIYEDQVGKFDW
RRQYVGKPRFAYFDTPTQNARKLMVTTENNVIASLNLRNGEIIWRQVDKEGPEGNVDLML
FHGQDALTVSGGGRLLRSWDTNIGGLNWEILLETGSLQTGSLIGFAEGVKYIAILKKASI
SLHYLSNGHQKWSEALPESEKIQYQLLYSSGSGAVYLVGMVAGSHLVVIRYDIEDGKIIE
QVTVSAPWIRRLRDLCGIVADGILTCVDRESHSLWILPLESEHEPEQIVLQSLELELAEK
FEGKILTTQSSPLVASSAQFCLQLSESHYALLQLHDGVVSLLRDFVQAVLVSFATTGDKV
VAAIMTAKNKTAFGVNLYSAENGRRLLDTAMNFNLDPNCGQPEQLYIHAFLKKDDSVGYR
ALVQTLDHALIFIQQPGRIIWTREEALAEVVTMEMVDLPLTGTQAELEGEFGKKADGPMA
MFMKRLSSQLILLQAWSSQLLKMFYDARKPRSHSRNEITIENLARDEFNLQKMMVMVTAS
GKLFGIDSSSGTILWKQYFENVKPGSSFKLAVQRTTAHFPHPPQCTLIIKDKATRLSSLH
VFNPIFGKRSHINPPVLTRPILQSLLLPIMDQDYAKVLLLIDDEHKVTVFPSSRNILQQL
QDSAPVIFFYLVDPILGKLNGFRLHKDLRTEQIWEVVIPTETQKIVIVKGKRSNEHVHSQ
GRVMGDRSVLYKYLNPNLLAVVTESIDTHHERTFICVYLIDGVTGRIIHESVQRKARGPV
YVVHSENWVVYQYWNTKSRRNEMTVLELYEGTEQYNSTAFSSLDRPFSPMIFQQSYIFPS
AISLVEATITDKGITSRHLLIGLHSGGILSLPKAFLDPRRPEVPSEQSREENLIPYAPEL
PIRSEWYINYNQSVSRVRGIYTAPSGLESTCLVVVYGLDIFQTRVYPSKQFDVLKDDYDY
VLISSVLFGLIFTTMITKRLAQVKLLNRAWR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggaccaaacttttgcgagcatgctgggattttggaggaccgttctctctgta
cattctgggacattggaggaccgagcagtgatggtggtcctctctgagatttggcttctt
ttcgctctctttgagttttcagcggcgatttacgaggatcaagtcgggaagttcgactgg
cgacgtcaatatgttggaaagcctcggtttgcatactttgatacacctacacagaatgca
aggaaactcatggttactacagagaataacgtgattgcttctctcaacttaagaaatggg
gagatcatctggcgtcaggtggataaagaaggtcctgaggggaatgtggatctgatgttg
ttccatggacaggatgcactgactgtgtcaggaggagggcgattgttgcgctcatgggat
acaaacattggtggcttgaactgggagatcttgcttgagactggaagtttgcagacaggt
tctcttattggctttgctgaaggagtgaagtacattgccattctgaagaaagcgtccatt
tccctccattatctctcgaatggtcatcagaaatggagtgaagctttaccagaaagtgaa
aagatccaatatcagctcctgtactcgtcaggaagtggcgcagtgtatttagtggggatg
gttgctggctctcatcttgtcgtcattcggtatgacattgaggatggaaaaatcattgag
caggtgactgtgtccgctccctggatccgacgtttgcgggacctctgtggaattgttgca
gatgggatcttgacatgcgtagacagggaatctcactctctttggatattgccattggag
tctgaacatgaacccgagcagatagttttacagtctctagagctggaactagccgagaag
tttgagggaaagattttaacaacccagtcatctccattggtggcatcgtctgctcaattc
tgccttcagttgtcggagtcccattatgcattattacagctgcatgatggtgtagtaagt
ctactacgtgactttgtacaggctgtgttagtttcctttgctacaactggtgacaaagtg
gtggcagctataatgacagccaaaaacaaaacggcttttggtgtcaatctgtattcggca
gagaatggcagacggctgttggacacagctatgaactttaacctggatccaaactgtggc
caacctgaacagctctatattcatgcatttctgaagaaagatgattctgttggctatcgc
gcactggttcagacccttgaccatgcattgatcttcatccagcaaccaggtcggattatt
tggacacgggaagaggcgttagcagaagttgttaccatggaaatggttgatttgcctctg
acaggaacacaggcagaactggagggtgaatttgggaagaaagcagatggtccaatggca
atgttcatgaagagactgtcctcccagctaatccttctacaagcatggagttcccagctg
cttaaaatgttctatgatgcgcgaaaacctcgcagccactcaaggaatgaaataacaata
gagaacctggcccgggatgagtttaacctgcagaagatgatggtgatggtgacagcatct
ggaaagcttttcgggattgacagtagctctgggactattttgtggaagcagtactttgag
aatgtgaaaccaggatcctccttcaaattggctgtgcaacgaacgacagctcacttcccc
cacccgccacagtgtaccctgattattaaggacaaggcaactagactgagttctcttcat
gttttcaatccgatctttggaaagcggagccacatcaatccaccagtcctaacccggcct
attcttcagtctttgctgcttccaattatggaccaagattatgcgaaggtcttactcctg
attgatgatgaacacaaggtgacagtctttccctctagtagaaatatcctgcagcagctc
caggattctgcacctgtaatttttttctaccttgtggatcctattttggggaagttaaat
ggattccgtctccacaaggaccttaggacagagcagatctgggaagtggtgattccaaca
gaaacacaaaaaatagtgattgtgaaaggaaaacgttcgaatgagcatgtgcactcgcag
ggccgtgtcatgggagatcgcagtgtcctctacaagtatctgaatcctaacttgctggca
gtggttactgagagcattgatacacatcatgaacggaccttcatctgtgtctaccttatc
gatggggtgactggacgaatcattcatgaatctgtgcagcggaaagcaaggggaccagtt
tatgttgtgcactctgaaaactgggtggtgtaccagtactggaacaccaagtcccgaaga
aatgaaatgactgttttggaactatacgagggaacagagcaatacaatagtacagcattc
agctcgcttgatcgtcctttctctcccatgatctttcaacagtcttacatctttccttca
gccattagtctcgtagaggccacgatcacagacaaagggatcaccagccgtcacttgttg
attggtctgcactctggaggaattctttctttgccgaaagcatttctggatcctcgacgt
ccagaggttccatctgagcaaagccgggaagagaacttgattccatatgctccagaacta
ccaatccgatcagagtggtatatcaactacaatcagtctgtttctagagtgcggggaatt
tatacagctccttctggtctggagtccacatgcttggttgttgtctatggactggacatc
ttccagactcgagtttacccatcaaagcagtttgacgttctaaaagatgattacgactat
gtgctcatcagcagtgtcctctttggattgatttttacaaccatgatcacgaagcgcctt
gcccaagtgaagctcctgaaccgagcttggcgatag
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