Rhincodon typus (whale shark): 109912992
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Entry
109912992 CDS
T06055
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
rtp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109912992 (gabrb2a)
04082 Neuroactive ligand signaling
109912992 (gabrb2a)
04519 Cadherin signaling
109912992 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109912992 (gabrb2a)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109912992 (gabrb2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
109912992
NCBI-ProteinID:
XP_048459655
LinkDB
All DBs
Position
12:complement(49474109..49713202)
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AA seq
474 aa
AA seq
DB search
MLRVRKRGYFSAFSFPLLVAMVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGDPV
RVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIES
YGYTTDDIEFYWRGAPRAVTGVEKIELPQFSIVDYHLISKNVVFSTGSYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMCCFVFVFLALLEYALVNYIFFGRGPQRQKKIAEKAAKANNEKTRAEAKVM
DPHENILLSTLEIKNEMSVAEITMGITDPRSTMMPYDSSGIQYRKAGLSRHNFGRSALER
HVAQKKSRLRRRASQLKINIPDLTDVNAIDKWSRMIFPLVFGFFNVIYWLYYVN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgctgagagttcggaaaaggggctactttagcgctttctcgttccctttgctagtggcg
atggtctgtgcacaaagtgtcaatgaccccagtaatatgtcattggtaaaggagacggtt
gatagactgctgaagggctatgacatccgtttgaggccagattttggaggtgaccctgtg
cgtgttggcatgaacatagacattgccagtatagatatggtttctgaagtcaatatggat
tacactttgacaatgtacttccagcaagcttggcgggacaaacggctatcctactcagaa
atacctttgaatctcaccttggacaacagagtggctgatcagctctgggttcctgacaca
tacttccttaatgataaaaagtcttttgtgcatggtgtgactgtaaagaatcgaatgatc
cgcttgcacccagatggcacagttttatatggtctcagaattaccacaacagctgcttgc
atgatggacttgcgaagatatccacttgatcagcagaactgcacacttgaaatagagagt
tatggatatacaacagatgacattgagttctactggcgtggagctccacgagcagtgact
ggggtggagaagattgagttgccacagttttctatcgttgactatcacctaatttccaag
aatgttgttttctctacaggttcttaccccaggctttccctcagtttcaagcttaaaaga
aatatcggttacttcattctgcaaacgtacatgccctccatcttgatcactatcctctct
tgggtgtctttctggattaattatgatgcatctgctgcacgagttgctttaggtatcact
acggtacttacaatgactacaatcaatacccatctgcgggagacacttccaaagatccct
tatgttaaagccattgatatgtacttgatgtgctgctttgtgtttgtgtttttggcccta
ttggagtatgccctggttaactacatattttttggaagaggaccacaacgtcaaaagaag
attgcagagaaagcagcaaaagccaacaatgaaaagacaagagcagaagccaaggtaatg
gatccacatgaaaacattctcctgagcacccttgagattaagaatgaaatgagtgttgct
gagatcacaatgggtatcactgatcccagaagtaccatgatgccatatgacagctctgga
attcagtataggaaggcaggattgtcgaggcacaactttggaaggagtgccttggaaaga
cacgtggcccaaaagaagagcaggctaagaaggcgtgcttcccagctgaaaattaacatt
cctgatttgactgatgtgaatgccattgataaatggtcacggatgatatttcctcttgtt
tttggattcttcaatgtgatctactggttgtattatgtgaattaa
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