Rhincodon typus (whale shark): 109913091
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Entry
109913091 CDS
T06055
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109913091 (rnf170)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109913091 (rnf170)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109913091 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
zf-rbx1
GCP5-Mod21_C
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109913091
NCBI-ProteinID:
XP_020368153
LinkDB
All DBs
Position
1:complement(162407744..162449304)
Genome browser
AA seq
262 aa
AA seq
DB search
MEQNPEQFFGTRIDESSLIEGVSNQVLLTLAITITMLGGLATFLYRTEHQNIHPDNQERV
RELRQHLQAEALSYQDGFERDRQQFYTDLSCPVCLQQAAFPVETNCGHLFCGSCIVAYWT
YGTWLGAVNCPICRQMVTLLFPLFPVNDEQQESLQVTQNINDYNRRFSGQPRSFIDRILD
VPTLLRHAFAELFSISGLFWMFRIRIFLCLAGALFYLASPLDFIPEAFFGILGFLDDLFV
IFLLLIYISIMYREAVTQRLNR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaatccagaacaattttttggaacaagaattgatgagtcttcactgattgaa
ggagtaagcaaccaagtacttctgacattagctatcaccattacaatgttgggtggtttg
gcaacattcctgtatagaactgagcaccagaacatccatcctgacaatcaagaacgtgtg
agggagctccgtcagcacctccaagctgaggctttaagttatcaggatggatttgaaaga
gatagacagcaattctacacagatttgtcctgtccagtctgtttacagcaagctgcgttt
cctgttgaaaccaactgtggtcacctattctgtggttcctgtattgttgcatactggact
tatggcacgtggttgggagcagttaattgtcccatctgcagacaaatggttacattgtta
ttcccattgttcccggtgaatgatgagcagcaagagtctctgcaggtcactcaaaatata
aatgattataacagaagattttctggtcagcccagatcttttatagatcgtatattggat
gttcccacactactgcgtcatgccttcgcagaactgttttcaatcagcggcctgttctgg
atgttccgaatacgaattttcctctgtctggctggtgccttattctatttagcatcaccg
ctggactttattcctgaagcattttttggaattctgggttttctggatgacctatttgtt
atttttctactcctcatctatatttctatcatgtatcgagaagcggtaacacaaagattg
aatagatga
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integrated database retrieval system
