Rhincodon typus (whale shark): 109913108
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Entry
109913108 CDS
T06055
Symbol
opn3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109913108 (opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109913108 (opn3)
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109913108 (opn3)
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Vision
Opsin
109913108 (opn3)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
109913108
NCBI-ProteinID:
XP_020368171
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All DBs
Position
9:71293084..71313352
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AA seq
387 aa
AA seq
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MNPANSTDAREEILFSPTTYKVLAAGVGTIGVVGVCNNFLMLLLYCKFKRLKTPTNLLLV
NISISDLLLSVFGVVFTFVSCVRGRWVWDSTACVWDGFSKSLFGISSIMSLAVLAYERYI
RVVNAKAIDFSWAWRAITYIWLYSLAWSGAPLIGWNRYSLELHKLGCSVNWDSRNPSDTS
YVLLLFLGCLLVPVGVIAYCYGNILYSIRMLRHIQDLQSVRLAKILTYEKNMAKMCFFMI
TIFLFCWVPYAVLSFMLVYGYADKITPTVTIILSLLAKSSTAYNHIIYLFMSKKYRWCLM
QLLCSRLMRIKWIIKDHAVRVRGEKPGKSIVLSEKVVERPKKRVTFSSSSIIFIITSDET
QDIDSTADVNSTNLNVVQVRPLKSERA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagcaaatagtaccgacgcccgggaggaaatcctcttcagccccactacctac
aaagttctggcagccggcgtaggcacgatcggcgtggtgggggtctgcaacaatttcttg
atgttgctgctctactgcaaattcaagaggctcaagacccccaccaacctgcttctggtg
aatatcagcatcagcgacttactactgtccgtcttcggagtcgtctttacctttgtctcc
tgcgtgagagggcggtgggtttgggactccaccgcttgtgtctgggacggtttcagtaag
agcctatttggaatttcatcaataatgtcacttgcagtcctagcatatgagcgctacatc
cgagtggtgaacgcaaaggcaattgacttttcctgggcctggcgtgctatcacctacatc
tggctttactcactggcctggtctggagcaccattaatcggttggaacagatactctctg
gagctgcacaaactaggctgctcagtgaactgggactccagaaacccaagcgatacatcg
tatgtcctcctcttattcctgggctgtctgctcgtccctgtaggtgtcatagcttactgc
tatgggaatattttatatagcataaggatgcttcgacatattcaagacctccagtcagtc
cgacttgcaaagatattaacatatgagaagaatatggcgaagatgtgcttcttcatgatc
actatatttttgttctgttgggtgccgtatgcagtgttgtccttcatgctggtttatggc
tatgctgataaaattactcccactgtaaccataattctttcactacttgccaagtcaagc
acagcatataatcatatcatttatctcttcatgagcaaaaagtatcgatggtgcctaatg
caactgctttgctctcgcctgatgagaattaagtggataataaaagatcacgctgttcga
gtccggggtgagaagccaggaaaatctattgtcttgtctgaaaaggttgtggagcggcct
aaaaagagagtgactttcagttcatcttcaatcatctttatcataactagtgatgaaact
caggatattgatagcactgctgatgttaactccacaaacctgaatgttgtacaagtgaga
ccattaaagtcagaaagagcataa
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