Rhincodon typus (whale shark): 109913159
Help
Entry
109913159 CDS
T06055
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
109913159 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109913159 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtp03310
]
109913159 (esr1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
109913159 (esr1)
Nuclear receptors [BR:
rtp03310
]
3. Estrogen like
3A. Estrogen receptor
109913159 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
ERbeta_N
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
109913159
NCBI-ProteinID:
XP_048456848
LinkDB
All DBs
Position
9:complement(15408526..15661415)
Genome browser
AA seq
590 aa
AA seq
DB search
MLVMAIPLHHKSPAIALLQKIQASDLDTFGRQTLQLPISGDGPLNEIYVEKNRAGAMNYP
ESGYEFAAAATLYNPAGLGYTTSSDSHGSSNIGGLHSLNSISPSPLVFLQTAPQLSSFVA
HGQQVPYYVENEQSSCSSFGLREAPPSTFYRINSDNRRQRVNDHLSSTSEQSSPSAGTLE
SSKETRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSC
QACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRRKDEKEHIIKSTGVTSRPSSSSVSPVQR
NAKHSSLLGMTSEEILSTLMEAEPPMVYSEHDPSKPFTEASMMTLLTNLADKELVHMIIW
AKKVPGFVDLTLHDQVQLLECCWLEILMIGLVWRSMEHPGKLIFAPDLVLDRNEGKCVEG
MVEIFDMLLATVSRFRLLKLQCEEYICLKAIILLNSGVFPFLSSTMEALNDSEQIQIILD
KITDALVHFITRAGLSLQQQSRRLAQLLLLLSHIRHMSNKGMEHLYSMKCKNVVPLYDLL
LEMLDAHRMHTPMDKPQPGGNGANPINRGTMPSSSLLSLKKTDVSFETSR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatggcaattccactccatcacaaatcacctgcgattgctttgctgcagaag
attcaggctagtgacttggacacttttggcaggcaaactctgcagttacctataagtggc
gatggacctctgaatgaaatctatgtggaaaaaaaccgagccggagcaatgaactaccca
gaaagcggctacgagtttgctgcagcggctaccctgtacaacccagctggtctcggctac
acaacctccagtgactcgcatggctccagcaacatcggggggctccactccctcaacagc
atttctccgagcccgctggtctttttgcagactgcgccccagctctcgtcctttgtggct
catgggcagcaggtcccctactatgtagagaatgaacagagcagctgcagcagttttggc
ttgagggaggctcccccttcaaccttttacagaattaacagtgacaacagacgccagcga
gtgaacgatcacctctccagcaccagcgagcaaagcagcccgtctgcgggcacattagaa
tccagcaaggagacacggtactgtgcggtgtgcagtgattacgcctcgggctatcactat
ggagtctggtcatgcgaaggctgtaaagccttttttaagagaagcattcaaggacacaat
gactacatgtgccctgccacaaaccagtgtaccatcgacaaaaatcgcaggaagagctgc
caagcctgcagactgcgtaaatgctatgaagtgggcatgatgaaaggtggtattcggaag
gaccgtaggggtggtcggatgttgaagcacaagcggaggaaagatgagaaggagcacatt
attaagagtactggagtcaccagcagaccgagctccagcagtgtgagcccggtgcagagg
aatgccaagcacagctcactgctgggcatgacctcggaggagattctcagcaccctgatg
gaagccgagccgcccatggtttactccgagcacgaccccagcaaacccttcaccgaggca
tccatgatgactttgctaacaaacctggccgataaggaactggtgcacatgatcatttgg
gctaagaaggttccaggatttgtggatttaacacttcatgaccaggtgcaactgctggaa
tgctgctggttagaaattttgatgattggccttgtctggcgatccatggaacatcccgga
aagctcatatttgcaccagatctggttttggacaggaatgaagggaaatgtgttgaaggg
atggtggaaatatttgacatgctcctagcaaccgtgtcacgattccgcctgctaaagctt
cagtgcgaggagtacatctgtctgaaggccatcattttgctgaattctggagtgttccca
ttcctctccagcaccatggaagccctgaacgacagtgagcagattcagatcatcttggac
aaaatcactgatgccttggttcactttatcaccagggctggcctctcactgcagcagcag
tcccggagactagctcagcttctgctactgctctcccacatccgacacatgagtaacaag
ggaatggaacacctctacagtatgaaatgtaagaatgtggtaccactctatgatttgctc
ctggagatgctggatgctcacagaatgcacacgccaatggacaagccacagcctggagga
aatggagccaatccaataaatagagggaccatgccttcctcttctttactgtcactaaag
aagacagatgtgagttttgaaacatcaagatag
DBGET
integrated database retrieval system
