Rhincodon typus (whale shark): 109913180
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Entry
109913180 CDS
T06055
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04142
Lysosome biogenesis
rtp04144
Endocytosis
rtp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109913180
04142 Lysosome biogenesis
109913180
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109913180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109913180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109913180
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109913180
Exosome [BR:
rtp04147
]
Exosomal proteins
Proteins found in most exosomes
109913180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
TPR_COPA_B
TPR_Vps41
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
109913180
NCBI-ProteinID:
XP_048468295
LinkDB
All DBs
Position
26:5942531..5975028
Genome browser
AA seq
981 aa
AA seq
DB search
MGVYVCKSLKVAGQVERAVDEAYSVLSFIYGSIEYKSKEMMFNLHKPLITPQQNIMYSYG
HHIMEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLL
DVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALA
KIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDMELINVCNENSLF
KSLSRYLVRRKDPELWANVLQETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADL
PNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAI
SNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKEM
VKEAIDSYIKADDPSSYMEVVEAANKSGNWEDLVKYLQMARKKARESYVETELIFALAKT
NRLAELEEFINGPNNAHIQQVGDRCYDDRMYEAAKLLYNNVSNFGRLASTLVHLGEYQAA
VDGARKANSTRTWKEVCFACVEGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELI
TMLEAALGLERAHMGMFTELAILYSKYKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAE
LVFLYDKYEEYDNAIITMMSHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLN
DLLMVLSPRLDHTRAVNYFTKVKQLNLVKPYLRSVQSNNNKSVNESLNNLFIQEEDYQAL
RTSIDAYDNFDNISLAQRLEKHELIEFRRIGAYLFKGNNRWKQSVELCKKDRLYKDAMQY
ASESKDTELAEELLQWFLEDGKNECFAACLFTCYDLLRPDVVLELSWRHNIMDFSMPYFI
QVMREYLSKVDEIKKKVDKLDISESLRKEEEQATETTPIVYGQSQLMLTAGPSVSVPPQA
AYGYSYGAQPYAQPGTYGYSM
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttatgtgtgcaagtcattgaaagtggcaggacaggtggagagagcagttgat
gaagcatatagtgttcttagctttatttatggcagcatagagtacaagagcaaagagatg
atgttcaacttacacaagccacttattacacctcagcagaatattatgtacagttatggg
catcatattatggaggccaaactgactgaccaactgcctctgattatcgtttgtgatcgc
tttgactttgtgcatgacctggtgttgtacctgtaccgcaacaaccttcagaagtatatt
gagatatatgttcagaaggtgaacccaagtcgtctgccagttgtagttggagggcttctg
gatgtagattgttcagaagatgtcattaagaatttaatccttgttgtacgtggacagttc
tctactgatgaactagttgctgaagtagaaaagaggaacagactgaagttgctgctgccc
tggctggaatctcgcattcatgaaggctgtgaggaacctgctacacataatgcacttgct
aaaatttacattgacagcaacaataaccctgagcgtttcctcagggagaacccatattat
gatagccgtgtggttggtaaatactgtgagaagagagacccccacctggcttgtgtggct
tatgagcgtggccaatgtgacatggagcttatcaatgtgtgcaatgaaaactctctgttc
aagagcttgtcccgttatctcgtccgtcggaaagatcctgaactctgggcaaatgtcctg
caagagactaatccttacaggagacctcttattgaccaggttgtacaaacagctctgtca
gaaacccaggaccctgaggaggtttctgttactgtaaaggctttcatgactgctgacctt
ccaaatgaactaattgaactgttggaaaaaattgtcctggacaattctgtcttcagtgag
cacagaaatctacagaacttgctgatcctcactgctatcaaagctgaccgtacccgtgtg
atggagtacattaatcgtctggacaactatgatgcacctgacattgccaacattgccatt
agcaatgaactatttgaagaggcatttgccatctttaggaaatttgatgtgaatacatct
gcagtgcaggtgctgattgagcatattggaaatctggaccgtgcttatgaatttgctgaa
aggtgcaatgagcctgcagtatggagccaactagctaaagcccagcttcaaaaagagatg
gttaaagaggccattgactcctatatcaaggcagatgatccttcttcatacatggaggtg
gtagaagcagccaacaaaagtggtaactgggaggaccttgtaaagtacttgcaaatggct
aggaagaaggcccgtgagtcttacgtggagactgaacttatttttgcgctggcaaaaacc
aaccgcttagcagagctggaggagttcattaatggtcccaacaatgctcacatccagcaa
gtgggtgatcgttgctatgatgaccgtatgtacgaagctgctaagctgctgtacaataat
gtctccaactttggccgtttggcatcaaccctggttcatctaggagaatatcaggctgca
gtggatggtgctcgcaaagcaaacagtactcgtacttggaaggaggtatgttttgcctgt
gttgagggaaaggagttccgtctggctcagatgtgtggcctccatatcgttgtacatgct
gatgaactggaggaacttattaactactaccaggaccgtggttactttgaggaactgatc
accatgttagaggcagcacttggtctagagcgtgctcatatgggtatgtttactgaactg
gctattctatattccaaatacaagccccagaagatgagggaacacctggagctcttctgg
tccagagtcaatattcccaaggtgctaagagctgctgagcaggctcacctgtgggcagag
ttagtcttcctgtatgacaagtatgaagagtatgacaatgccatcattaccatgatgagc
catccaacagatgcatggaaggaggggcagttcaaggacatcatcaccaaggtggccaat
gtggagctctattacaaagcaacacagttctacttggagtttaagcctttattactgaat
gaccttctcatggtgctatctcctcgtctggaccatacacgtgctgtgaactactttact
aaggtgaaacagctgaatttggttaaaccctacctgcgctctgtacaaagtaacaacaac
aagtctgtgaatgaatcattgaataatcttttcatccaagaggaagactaccaggcactt
cgcacatcgatagatgcatatgacaactttgataatatctctctggctcaacggcttgag
aaacatgaactgattgagttccgacgaattggtgcttatctgttcaagggcaacaaccgt
tggaagcagagtgtggagctgtgcaagaaagacagactgtataaagatgctatgcaatat
gcgtcagagtccaaggatactgagcttgcagaagaactgcttcagtggttccttgaggat
gggaagaatgagtgctttgctgcttgtctatttacttgctatgacttgctgaggccagat
gttgtgcttgagctgtcttggaggcacaacatcatggatttctccatgccttacttcatc
caggtgatgagagagtatctctcaaaggttgatgaaataaagaaaaaggtggataagttg
gacatctctgaatctctgaggaaagaggaggaacaggctactgagacaacccccattgtt
tatggtcagtcacaactcatgttgacagcaggacccagtgtgagtgtccctccacaggca
gcctatggctacagttatggtgcccaaccatatgctcagcctggcacatatgggtatagt
atgtaa
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