Rhincodon typus (whale shark): 109913517
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Entry
109913517 CDS
T06055
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109913517 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109913517 (tmco1)
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
109913517 (tmco1)
Transporters [BR:
rtp02000
]
Other transporters
Pores ion channels [TC:
1
]
109913517 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF6809
DUF5683
DUF2368
Vpu
Exonuc_VII_L
DLH
DSHCT
DUF4257
Piezo_TM1-24
Ctr
DivIC
DUF2207_C
Peptidase_S49_N
Nucleoside_tran
SieB
Dynamitin
DUF3987
Motif
Other DBs
NCBI-GeneID:
109913517
NCBI-ProteinID:
XP_020368631
LinkDB
All DBs
Position
10:13865213..13891994
Genome browser
AA seq
188 aa
AA seq
DB search
MSTMCADTILIVFISVCTALLAEGITWVLVYRTEKYKRLKAEVEKQSKKLEKKKEAITES
AGKQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKLLGLAPSRAATKQAGGFLGP
PPQASKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccatgtgtgctgacaccattctcatcgtctttatctcggtctgcactgcgcta
ttagctgaaggtatcacatgggtactggtgtatagaactgaaaaatacaagcgtttgaag
gcagaagtagaaaaacagagtaagaaattagaaaaaaagaaagaggccattacggaatct
gcagggaaacaacaaaagaagaaaatagagagacaagaggaaaaactgaaaaataataat
cgggacctctcaatggtgcgaatgaagtctatgtttgctattggattctgtttcaccgct
ttgatgggcatgtttaattctatatttgatggacgagtagtagctaagctcccatttgtg
cctttgtcgtacattcagggtttgtcccatcgcaaccttcttggagaagattacactgac
tgttctttcattttcttgtatattttatgtacaatgtccattcgtcagaatatccagaaa
ctactgggtcttgctccttcacgtgctgctacgaaacaggcgggaggattcctgggacct
ccacctcaagcaagcaaattctcatga
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integrated database retrieval system
