Rhincodon typus (whale shark): 109913533
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Entry
109913533 CDS
T06055
Symbol
gria1a
Name
(RefSeq) glutamate receptor 1a isoform X1
KO
K05197
glutamate receptor 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109913533 (gria1a)
04082 Neuroactive ligand signaling
109913533 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109913533 (gria1a)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Glutamate (ionotropic)
109913533 (gria1a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
109913533
NCBI-ProteinID:
XP_048459548
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Position
12:complement(61138526..61332981)
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AA seq
897 aa
AA seq
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MQQSILTILCSGLLGCVLGAFPSSLQIGALFPKQQSQEYSAFRFGLSFYNTDTLYKLITQ
TENVDISNSFAVTNAFCSLFARGVYAIFGFYDRKTVNTLTSFCGALHLSFITPSFPVDTS
NQFVIQMRPDLQTALLNLIEHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVSIE
TTTEEGYRMLFKDLDKRKDRHVIIDCEADKLTTIMNQIISIGKHIRGYQYIFASLGFMDM
DLDKFQHAGANVTGFQIVRPDSAQVLKFLQRWKKLDGKEYQGVEGHKLKYTSAMTFDGVL
VLSEAFKYLRKTRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRSDGLTGNIQFNEF
GHRTNYTVNVLELKSDGIRKIGYWNEDDKFVATTGDHHIGNDTSGIQNRTYFVTTILEPP
YVMLKKNHDQLEGNDKYEGYCVELAAEIAKHVGFKYKLAIVADGKYGARDPDSKVWNGMV
GELVYSKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE
IWMCIVFAYIGVSVVLFLVSRFSPYEWQTEEYEDGPDAQSLDQTNEFGIFNSLWFSLGAF
MQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE
IAYGTLDAGSTKEFFRRSKIAVFEKMWAYMKSAEPSVFVKTTEEGVIRVRKSKGKYAYLL
ESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNPVNLAVLKLNEQGLLDKLKN
KWWYDKGECGSGGSDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRTEAAR
MKQLSISEAMRATERVPAQGGTGENGRIVTHDYSKSMQTLPRMSHTSGMSLGATGIS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatccatcctcaccatcctgtgctcgggattgttgggatgtgttttgggagcg
ttccccagcagcttgcaaatcggtgctctcttccccaaacagcaatcccaggaatattcc
gctttccgtttcggattatcgttctacaacacggacactttgtacaagctcatcacccag
acggagaacgtggacattagcaacagtttcgccgtcacgaacgccttctgctcgctgttc
gctcgcggagtctatgcgatctttgggttttacgacaggaagacggtaaacacactcaca
tcgttttgtggagccctgcacctctcgttcatcactcccagcttccccgttgatacctcc
aaccagtttgtcattcagatgagacctgacctacagactgctctgctcaacctcatcgaa
cattacaaatggcagaagtttgtgtatatttacgatgctgatcgcggactgtctgtacta
cagaaggtgctggacacagctgcagagaagaactggcaagtaacagcagtcagtattgag
accaccactgaagaaggttaccggatgctctttaaagatttggacaagagaaaggatagg
cacgtcatcattgactgcgaggctgataaactcaccaccatcatgaatcagatcataagc
attggaaaacacatccgagggtatcagtacatcttcgcaagcctgggtttcatggacatg
gatctcgataaattccagcatgcaggagcaaatgtgactgggtttcagattgtgcggccc
gacagtgctcaagtattaaaattccttcagcgttggaagaaactagatggcaaagagtat
caaggagttgaaggacataaactgaagtatacgtcagctatgacctttgatggagtgctc
gtgctgtctgaagctttcaagtacctacgcaagacaaggatcgacatctctcggagagga
aatgcaggagactgtttggcaaatcctgctgtaccttggggtcaagggatagacattcaa
cgagccttacagcaggttcgtagtgatgggttaactgggaacattcagtttaatgaattt
ggacatcggaccaactacactgtcaatgtgttggagctgaaaagtgatggaattagaaag
attggatattggaatgaagatgacaagtttgttgcaacaacaggggaccatcacattggc
aacgacaccagtggcatccagaatcggacgtattttgtaacgacaatcttagaacctcct
tatgtgatgctgaagaagaatcacgatcagctagaaggtaacgataaatacgaaggttac
tgtgtggagctggcagcggagattgccaagcacgtgggcttcaagtacaaactcgcaatc
gtggcagacggaaaatacggagcaagggatccagactccaaagtgtggaatgggatggtc
ggcgagcttgtgtattcaaaagctgatatcgcagtggccccattaaccatcaccttggtg
cgggaggaggtcattgacttttccaaacctttcatgagcttggggatctccatcatgatt
aaaaaaccccagaaatccaaaccaggggttttctccttcctggaccccttggcgtacgag
atctggatgtgcatcgtgttcgcctacattggtgtgagcgtggtcctgttcctggtgagc
agattcagcccctatgagtggcaaacagaggagtacgaagacggacctgatgcccaaagt
ctcgaccagaccaacgaatttggaatatttaacagtctctggttctctctgggcgccttt
atgcagcaaggatgcgatatttcgccaagatccctgtcgggcagaattgttggtggagtt
tggtggttcttcaccttgatcatcatctcatcctacactgccaacttagctgccttcctg
acagtcgaacgaatggtgtctcccattgagagcgcagaggaccttgcaaagcagacagag
atcgcctatggaacgcttgatgctggatcaacaaaagagtttttcaggagatcaaagatt
gccgtcttcgaaaagatgtgggcttatatgaagtctgctgaaccttcggtctttgtcaaa
accacagaggaaggtgtaatccgtgtgagaaagtccaaagggaagtatgcctatctcttg
gagtcaaccatgaatgagtacattgagcagaggaagccgtgtgataccatgaaggttgga
ggtaacctcgactccaagggatatggtgtggctacaccaaaaggatcacctttaagaaat
cccgtaaacctggcagttcttaaactgaacgagcagggactcttggacaaattgaaaaac
aaatggtggtacgacaagggggagtgcggcagtggaggcagtgactccaaggacaagacg
agtgcgctgagtctgagcaacgtagcaggagttttctacatcctgattggtggacttgga
ttggcaatgctcgtggcgctagtggagttttgttacaagtcaagaaccgaagcagcacga
atgaagcagctttcgataagtgaagcgatgagggccacggagagggtcccagcacaggga
ggcactggtgagaacgggcggattgtaacccacgattacagcaagtccatgcaaacctta
ccccgtatgagccacacaagtggaatgagtctgggtgccactgggatctcataa
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