KEGG   Rhincodon typus (whale shark): 109913600
Entry
109913600         CDS       T06055                                 
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1
Organism
rtp  Rhincodon typus (whale shark)
SSDB
Motif
Pfam: GPS2_interact 7tm_1 Myb_DNA-binding DUF4798 7TM_GPCR_Srsx LOB
Other DBs
NCBI-GeneID: 109913600
NCBI-ProteinID: XP_048468270
LinkDB
Position
26:379214..754427
AA seq 1757 aa
MTDCPKMSSSGYPQGQGPFGAEPNRYPTHAIPYSFSSSRHQQEFAVPDYRLQDSQLLQQQ
HQQLRRRPSLLSEFHPASDRPQERRSGYEQSYHSVAGQPDHESLESKRPRLEQVPDPHFQ
RATVLPLAHPVPEGLRAPTEVKKESFSMKADVPSSPTTNQQVGDEQDSSPSKLSKEELIQ
SMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEPKHRSIVQIIYDEN
RKKAEEAHKILEGLGPRVELPLYNQPSDTKIYHENIKTNQVMRKKLILFFKRRNHARKQR
EQKICQRYDQLMEVWEKKVERIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVG
QRGAGLPATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVKFLNMNGV
MDDPMRVYKERQFINVWSEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKK
NENYKNLVRRNYGRRRGRNTQQISRPSQEEKETEKEEEKVEKVEREEKDEKKEEEKDDKE
EPQRETIKEKDKPDTAGEEPEEKEQSAPRGRKTANSQGRRKGRILRSMAKEAISEEPPNP
PPPPELGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDMLLQQHKLRVQQMSRR
SREDREVSQCESIASTVSAQEDEDNEVSNEEENPEDSEGAENSSDTESAPSPSPVDTGKS
SKESTETNKLTEEELNPTSKSSPIIPPVSPAPAAALPELQVKQEMNLGFEESMEGQRGSD
AEAKPVFEPQVKPKTEPVDVDMKPEENLQVKVEVDAKDKQFEKARQQETVASELLDLPQP
GAQVESHSDNDSSATCSADEVEDGEPERQRMFSPESKSSLLKPLGSVLMTSAMKPVQMDI
QQLQQRAAMIPNMMAAPYVPTTAPVSGLALFQRHIKAMHDSALQEEQMRQRQEHMDAERR
TSSSPNISSKTCPVLDREGKPFVYMPYHEARRVMEQESQTAGARSASPYRLSPRESCKLS
PQPEMNNLRYSVPPVLQPAPHQMMQTTSEGGKLVITRPARPSNIPSPPPLIPSTKPPLST
EKPSFNMGGSISQVSSGTYLAPHNQVAYSQEAVKNTVGSISLGLPRQQEPVKPGPLQFIK
QEELSPRSQNPQPEGLLSRATYETNVVRGGPMGNIQEASLTRSSPASKVSAEPPPYRGSI
TQGTPGLSQQGIAADTLLKGAISKLAAEESGSPEQSREEAISKGHVIYESNSGHILSYDS
KYNGLITGRRARLIIGVFWILSFVIGLTPFFGWNQRNEVECRNGTMRTPRPENNSVLQNC
SVECLFLNVVNMKYMVYFNFLGCVLTPLLIMLGIYLKIFTVARKQLQKIELNSVNSETSR
RYLQNQVRVAKSLSIIVGFFALCWLPLHILNCINHFHPKYFQTMDTRIMNAAIVLSHANS
VGNPIIYAYKIQEFRNTFHKIIFKQILYRTDHEFKSETMRGTHLPGKSPERSHISSEPYE
PISPPQVPANLEKQESVVQPPQRREAEPAEQRLPPSNEWLPMPLLVRRGRAPDSATRSEA
RSPGNVSYLPAFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDIANAQPGTEIFNLPAVT
SSGSVSSRSHSFADPASNLGLEDIIRKALMGKYDDKGEDHQVVLSHPVSASQGNMSTSIP
VSSDARNEEANPSPPSGSTAFPYNPLTMRMMSVAPTSIACAPPAMGQASSHPPARTWERE
PAPLLSSQYETLSDSDD
NT seq 5274 nt   +upstreamnt  +downstreamnt
atgacagactgcccaaaaatgtcaagttcaggttatccccaaggtcaaggcccatttggt
gcagaaccaaaccgatacccaactcatgcaattccatatagcttctccagcagcaggcac
cagcaggaatttgcagttccagattatcgccttcaggattcacagctcttacagcagcag
catcagcagctgcgtagacgcccgtcgctgctttcggagttccatccagcctctgacagg
cctcaagaaaggaggagtggctatgagcagtcgtaccatagcgtggctggacagcctgat
cacgaatcattggaatccaaacgcccacggcttgaacaggtacctgatccccactttcag
cgtgctacagtactgcccttagctcacccagtaccagaggggcttcgagcacccacagag
gtgaaaaaggagtctttttcaatgaaggctgatgttccatcatcaccaacgaccaatcag
caggttggagatgaacaagattcatctccttccaaactatccaaagaggaactcatccag
agtatggaccgtgtagaccgagaaatagccaaagtggaacagcaaatcctcaaactgaag
aaaaaacagcaacagcttgaagaggaagctgccaaacctccagagcctgagaaaccagtc
tcccctcctccagtggaaccaaaacatcgcagtatcgtccagattatctatgatgaaaac
aggaaaaaagcagaagaagctcacaaaatacttgaaggtctgggtccaagagtagaattg
ccactttacaaccagccatctgatacgaagatttaccatgaaaacatcaaaacgaaccaa
gtaatgcggaaaaaactgatcctttttttcaagaggagaaaccatgctcgtaaacagagg
gaacagaagatctgccagcgttatgaccagctgatggaggtgtgggaaaaaaaagttgaa
agaatagaaaacaacccccggcgtaaggccaaggagagcaagaccagggaatattatgag
aagcaattccctgaaatccgcaagcaaagggaacagcaggaacgatttcaaagagtggga
cagaggggagctgggcttccagcaactatagcgaggagtgagcatgagatttcagaaatt
atcgatggactttctgaacaagagaataatgagaagcagatgaggcaactttctgtgatt
cctccaatgatgtatgacacagaacagcgaagagtgaaattcttgaacatgaatggagta
atggatgatcccatgagagtatataaggaacggcagttcataaacgtctggtctgagcat
gagaaggagatcttcaaagagaagtttgttcaacacccaaaaaactttggcttgatagca
tcttacctggaaagaaagtgtgtagcagactgcgttttgtattattatttgacaaagaaa
aatgagaactacaagaatcttgtaaggaggaactacggccgccgcagaggaaggaatacg
caacaaatttctcgcccttcacaagaagaaaaagaaactgaaaaagaagaggaaaaagtt
gaaaaagtagagagagaagaaaaggacgagaagaaggaagaggagaaagatgataaagaa
gaacctcaaagggaaaccatcaaggaaaaggacaaaccagatactgcaggagaggaacct
gaagaaaaggaacagtctgctccacgagggcggaaaactgcaaacagtcaggggaggcgg
aaaggcaggatcttgagatccatggcaaaagaagccatcagcgaagagccacccaacccc
cctcctccacctgaacttggacttgtggaacatgggcggaactgggcagccattgcaaag
atggtgggcaccaaaagcgaagcacagtgcaagaatttctacttcaattacaagaggagg
cacaacctggacatgctacttcaacagcacaaacttagagtgcaacagatgtcacggaga
tctcgtgaggaccgggaagtgtctcaatgcgaaagcattgcttcaactgtgtctgcacaa
gaagatgaggacaatgaagtgtccaatgaggaggagaatccagaggacagtgaaggagct
gagaacagctcagatactgaaagtgcaccttcaccatcacctgtggacacaggcaagtca
agcaaagaaagtacagagacgaacaaattaactgaagaagagctcaatcccacaagcaaa
agttctccaattattccacctgtctcaccagctccagctgctgctttgcctgaactgcaa
gttaaacaagaaatgaacttaggctttgaggagtcaatggaggggcagagggggtctgat
gctgaagcaaagcctgtgtttgagcctcaggtgaagcccaaaactgaacctgtggatgtg
gatatgaaaccagaagaaaatctgcaggttaaagtggaggttgatgccaaagacaaacaa
tttgagaaggccagacagcaggaaacagtggcatcagagctacttgatctgccgcagcct
ggagcacaggtggaatctcactcagacaatgattcaagtgcaacttgcagtgctgatgag
gtggaagatggggaacctgagaggcaaagaatgttttctccggaatcgaaatcgtcattg
ctgaaacctctcggctccgtgttgatgacttcagccatgaaaccagttcagatggatatc
cagcaactacagcagcgagcagccatgattcccaatatgatggctgcaccctatgtgcct
accactgcccctgtaagtggcctggccctatttcagcggcacatcaaggctatgcatgat
tccgcacttcaggaggagcagatgcgacaaaggcaagaacatatggatgctgagcgcaga
acctcttccagtcccaacatcagcagcaagacctgtccagtcttggacagagaaggtaaa
ccatttgtttacatgccatatcacgaggcaaggcgtgtgatggagcaggaatcacagaca
gcaggagccagatccgcatcaccatacaggctgtccccaagggaatcctgtaaactttct
ccacagccagagatgaacaacttgcggtacagtgtgccaccagttcttcagcctgctcca
catcaaatgatgcaaaccacgtcggagggagggaagttagtgattaccagaccggctaga
ccatccaacattccctcccctccccccctcattccttcaacaaaaccaccactatccacc
gagaagccatcattcaacatgggaggttctatttcacaggtttcttctggcacataccta
gcccctcacaaccaagtagcttacagccaagaagctgtgaaaaacacagtgggttccatc
tccctcgggctgccacggcaacaggaacctgtgaaacccggtccattacagtttattaag
caagaggagctgtctcccagaagtcagaatccccagccagaaggactactctccagggct
acttatgagacaaatgtggtcagaggtggtccaatgggaaacatccaggaagcaagtcta
acacgaagcagcccagcaagcaaggtttctgcggaaccacctccttatcgaggttccatc
actcagggcactccaggcctctcacaacagggtattgctgcagacacattgttgaagggt
gcaatcagcaaattagccgctgaagaatcaggcagccctgagcagtccagggaagaggca
atatcaaaaggccatgtcatctacgaaagtaatagtggccatatcctctcatatgacagt
aaatacaacgggctgataactggaagacgtgccaggctgattataggagtcttttggatc
ctgtcttttgtgattggtttgactccattttttggctggaaccagaggaatgaggtagag
tgcagaaacggcacaatgaggacaccacggccagagaacaactctgtcctccagaactgc
tcggtggaatgcctctttctaaatgtagtcaatatgaaatatatggtttacttcaacttc
ctgggctgtgtcctgacaccattgcttatcatgctgggcatttatctaaaaatcttcact
gttgctagaaagcagttgcaaaagatcgagctgaattctgtaaattctgagacttccaga
aggtatttacagaaccaagtaagagttgcaaaatcattgtccatcattgttggattcttt
gccttgtgctggcttccacttcacatcctaaactgtatcaatcattttcacccaaagtac
ttccaaacaatggatacgcgtatcatgaacgctgccatcgttctgtctcatgctaactct
gttgggaatccgattatctatgcctacaagattcaagaatttcgcaacaccttccataaa
attattttcaaacagattctgtacaggacagaccatgaatttaagtctgaaactatgcga
ggaacacatttgcctgggaaatccccagaacgaagccacatttcatcagaaccatatgag
cccatctcacctccccaagttcctgccaatctggagaagcaagagagtgtagtgcaacct
cctcagcgaagggaggcagagcctgctgaacagaggctgcccccaagtaatgaatggctc
ccgatgcctttgcttgtccgaagaggtcgtgccccagattctgctacaaggagtgaggca
cgatctccagggaatgtgagctatttgccagcattcttcactaagctggagaatacttca
ccaatggtgaaatcgaagaagcaggagatatttcgtaagttgaactcctctggtggcggg
gattctgacattgctaatgctcagcctgggaccgagatatttaacttgcctgctgtcacg
tcatcaggttcagtcagttctcggagtcattcctttgcagatccagccagtaaccttggc
cttgaggacattatcagaaaagccttaatgggaaaatatgacgataaaggagaagatcac
caagttgtactgtctcaccctgtaagtgcatcacaaggcaacatgagcacatcgatccct
gtgtccagtgatgctcggaatgaggaagccaatccatcgcctccatcaggctcaactgcg
ttcccttataacccgctgacaatgcgcatgatgagcgtagcaccaacttcaatcgcctgt
gcaccaccagccatgggtcaagccagctcacatcctccagccaggacgtgggagcgcgag
ccagctcccttactctcctcccaatatgagacattatcagatagtgatgactga

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