Rhincodon typus (whale shark): 109913637
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Entry
109913637 CDS
T06055
Symbol
pdx1
Name
(RefSeq) pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109913637 (pdx1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
109913637 (pdx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109913637
NCBI-ProteinID:
XP_020368771
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All DBs
Position
6:complement(33199702..33206203)
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AA seq
268 aa
AA seq
DB search
MNSEEHYYAPAQMYKESCAYQRSQTQGYNQSPPACLYVGRQPQTSYVNPALSGLEQGSPA
DISPFEVPAISEDPTVSHLPHPQQQPPDPHTHQGACFGTSSEMGALDDHSRTHLPFPWMK
STKSHAHVWKGQWPGSSFMVEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAV
MLNLTERHIKIWFQNRRMKWKKEEDKKRVRNGAPEQDSVVSSGDLKEDVCAPNNPIGRDL
LSVSVSSSQPCSSLKSQGTVARDSAKNS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgaggaacattattatgccccggctcagatgtataaagaatcatgcgcttat
cagagatcacaaacccaaggatataatcaaagcccaccagcatgtctctatgtagggagg
cagccacagacttcatatgtcaaccctgccttgtcaggacttgaacaaggcagccctgct
gatatttctccctttgaagtacctgcgatatctgaggatcctacagtctcgcatcttccc
catccacagcagcagccccccgaccctcacacccaccaaggggcttgttttgggaccagc
tctgaaatgggggccctggatgaccacagtagaactcatctgcctttcccgtggatgaaa
tcgaccaaatcgcatgcccacgtctggaaaggacaatggccggggagttcctttatggtg
gagccggaagaaaataagcgcacgcgcactgcctacactagagctcagttgcttgagttg
gagaaggagtttcttttcaataaatacatctccagaccccgccgagtggagctggcggtc
atgttaaacctaaccgaacgacatatcaaaatttggttccaaaacaggaggatgaagtgg
aagaaagaagaggataagaagcgagtgaggaatggcgctccggaacaggactcagttgtc
tcctccggcgatcttaaggaggatgtttgtgctcccaataatcctattggaagagacctg
ctgtctgtcagtgtctcttcttcacagccctgctcttccttaaaaagccaaggtacagtt
gctagagactctgcgaagaattcgtaa
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