Rhincodon typus (whale shark): 109913648
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Entry
109913648 CDS
T06055
Name
(RefSeq) homeobox protein CDX-1
KO
K22234
homeobox protein CDX2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109913648
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
109913648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
109913648
NCBI-ProteinID:
XP_020368780
LinkDB
All DBs
Position
6:33152846..33160930
Genome browser
AA seq
254 aa
AA seq
DB search
MYVSYLLDKDMSMYSGSVRHSGINLGAQNFVNPPQYPDYAGYHVPGVNLDNHPQSSGSWP
SPYGPTREDWGAYAAPANTVHALNTSPGTLSYSPADYNSVQTSGAASMQPLNNNLLEQPS
PNSQRRNPYQWMRKPNQQLSATDKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAANLGLSERQVKIWFQNRRAKERKLTKKKLQQQSQQGSSQLSPAHPGTAASLSVTNGGI
LAANGGVLSGTVSQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctatcttttggataaagacatgagcatgtactcagggtccgtccgacat
tctggcatcaacctgggcgcacagaattttgtcaacccgccacagtacccggactatgcc
ggctatcatgtccccggggtcaatttggacaatcacccgcaatcttccggatcctggcct
tctccctatggccctacccgtgaggactggggtgcttacgctgcgcctgcgaacacggtc
catgccctcaacacttcgccagggactctgtcttacagtcctgcagattataattcggtt
cagacctcgggagctgcctccatgcagcctttaaacaataaccttctggaacaaccttct
cccaacagccaaagacgcaatccttaccaatggatgaggaaaccaaatcaacagctatca
gctactgataaaacaagaacaaaggacaaatatcgggtggtgtacacggatcaccagaga
ctggagctcgagaaggagtttcattacagtcgctacatcacgattcggcgcaaagcagaa
ctggcagctaacctggggctttctgagaggcaggtaaaaatctggtttcagaatagaaga
gcaaaagagcggaaactgacgaaaaagaagttgcaacagcagtcccagcaggggtcgtcc
cagctgagcccagctcatcccgggacagccgcttctctttcggttactaacggcggaata
ctggctgccaacggcggtgttttatctggaacagtgtctcagtga
DBGET
integrated database retrieval system
