Rhincodon typus (whale shark): 109913697
Help
Entry
109913697 CDS
T06055
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03082
ATP-dependent chromatin remodeling
rtp04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109913697
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109913697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109913697
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109913697
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
109913697
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109913697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Clp_N
Motif
Other DBs
NCBI-GeneID:
109913697
NCBI-ProteinID:
XP_048459534
LinkDB
All DBs
Position
12:43304305..43342496
Genome browser
AA seq
373 aa
AA seq
DB search
MSSRGGKKKTTKISRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAIANDEELNQLLKGVTIASGGVLPNIHPELLSKKRGS
KGKLEAIITPPPAKKAKSSQSPKKTGGKKGKKGAGKGGAKKKQTEVSKAASADSTTEGNP
GDTFTILSTKSLFLGQKLHLIHSELSNIASFEVEAIINPTSADIELKDDLGSALEKKGGK
EFTEAVNELRKKNGPLDTAGAVLSSGHGLPAKFVIHCNSPGWGSDKCEELLEKTVKNCLA
LADEKKLKSIAFPSIGSGRNGFPKQSAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESI
GIYVQEMAKLDGN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagaggtggaaagaagaaaacgaccaagatttctcggtctgcaaaagctggg
gttattttccccgttggaagaatgttacgttacataaagaaaggacatcctaagtacaga
attggtgtcggtgctccagtgtacatggctgcagttctggaatatctgaccgctgaaatt
ttggaattggctggtaatgctgctagagataacaagaagggaagagttaccccaaggcac
atcctgctggctattgcaaatgatgaagaactgaaccagctgctgaaaggcgtcactatt
gcaagtggcggtgtcttacctaacattcatccggaactattgtctaagaaacgaggatct
aaagggaagcttgaagccatcatcacaccaccaccagcaaaaaaagcaaagtcctcacaa
tctcccaagaaaactggaggaaagaaaggcaaaaagggagctggaaaaggaggggctaag
aagaagcaaacagaggtcagcaaagcagcatctgcagatagcactactgagggaaatcct
ggagacacgtttaccattctttccaccaaaagcctctttcttggacaaaagttacacctc
attcacagtgaactcagtaacatagccagcttcgaagtggaggccattatcaatcctacc
agtgctgacattgagcttaaagatgacctaggcagtgctttggagaagaagggtggcaag
gagtttacagaggctgtaaatgagctgcgcaagaagaatggtcccttggatacagcagga
gctgtgctaagttcaggtcatggactgccagccaagtttgttatccactgcaatagtcct
ggttgggggtcagacaagtgtgaggagctactggagaaaacagtgaagaactgtctggca
ctggcagatgagaagaagctgaaatccattgctttcccttcaattggtagtggcagaaat
gggtttcccaagcagagtgcagcacagctgatcctgaaggccatttccagctactttgtt
tcgacaatgtcatcctcaatcaaaactgtctactttgttctttttgacagtgaaagtata
gggatttatgtccaggagatggcaaagctcgacggtaattaa
DBGET
integrated database retrieval system
