Rhincodon typus (whale shark): 109913717
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Entry
109913717 CDS
T06055
Name
(RefSeq) prolargin
KO
K08125
prolargin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109913717
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
109913717
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRRNT
LRR_5
LRR_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
109913717
NCBI-ProteinID:
XP_048468208
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Position
25:complement(14099769..14121712)
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AA seq
393 aa
AA seq
DB search
MNHFGYILSICLILTTVVHCQRRQPKTKPPKPPKPPKPPKLPKAPKTPKPGKAIVIEPTE
PSHVTTLPPPLPPGPVSVYPDCPRECNCPPDYPNALYCDSRNLRMVPIIPPRIHYLYLQN
NFIDGLPERAFRNATELKWINLDNNRISNQKVDKEVFNILNKLLFLYMDRNKLSVVPANL
PSSLEQLRLSRNQISKIPAGSFSKMENLTLLDLHHNKLSDGVFNKNTFKGLKSLMQLNLA
HNSLKKMPPTIPQDVFQLFLDKNQIKEIPGDYFKNLHHLAFLRLNFNQLTDQGIPNGLFN
LSTLLDLHLSNNKLNSIPTFNTKLEHLHLSHNNIGKINGTEICPCPIDNIALHAHDLDVI
PRLRYLRLDGNALALPIPMEIRMCFRLLQAIVV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattttggatacatactctccatttgtcttattctgaccacagtggtccattgc
caacgtcgtcaaccgaaaaccaaacctcccaagcctccaaagcctccgaagcctcccaag
cttcccaaggctccaaaaactccaaagcctggaaaagcaattgtcattgagcctacagag
ccaagtcatgttacaacacttccaccacctctacccccaggtccagtgtctgtgtaccca
gactgcccaagagagtgtaactgcccccctgactatcccaacgcactctattgtgacagc
cgtaatctaagaatggtccccatcattccacctaggatccattatctctatctccaaaat
aatttcatcgatggtcttccagaacgggctttcaggaatgcaacagaactcaaatggatc
aatttggacaacaacaggatttcgaaccaaaaggttgataaggaagttttcaacattctg
aataaacttcttttcttgtacatggatagaaataaattaagtgtagttcctgcaaatctt
ccatctagtctagaacaacttcgactatctaggaatcaaatctccaaaatcccagcaggt
agcttcagcaagatggaaaatctcactttacttgacctccaccacaataagctatctgat
ggtgtgttcaataagaatacattcaaaggtctcaaaagcctaatgcagctcaacttggct
cacaattccttgaagaaaatgcctccaaccatacctcaggatgtcttccaactcttcttg
gataaaaatcaaatcaaggaaatacctggtgactatttcaagaatttacaccatttggca
tttttaaggctgaattttaaccagttgacagaccaaggtattcccaatggtctttttaat
ctatcaactctcctagatctccacctgtccaacaacaaactcaattcaataccaaccttt
aatacaaagctggaacacctgcatctcagccacaacaatattggaaaaatcaatggaact
gaaatctgcccatgtcccatcgataacattgctttacatgcccatgatctggatgtgata
ccacgccttcgatatctacgattggatgggaatgcgctggcgctcccgataccaatggaa
ataaggatgtgtttcagactcctgcaggcaatagtggtttga
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