Rhincodon typus (whale shark): 109913757
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Entry
109913757 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1-like isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
rtp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109913757
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109913757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109913757
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109913757
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109913757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109913757
NCBI-ProteinID:
XP_048465385
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All DBs
Position
21:complement(46318357..46708083)
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AA seq
544 aa
AA seq
DB search
MGDCVSNGMEKHAGGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLGNRPVQFPYVTP
AAHEPVKTLRSLVNIRKDSLRLVRYKDEADSLTDENAKPKVLYSVEFTFDADARVAITIY
CQATEEFQSGMAVYTSKYPCMHSETIHYKRGVSQQFSLPSFKIDFSEWKEDELNFDLDKG
VFPLVIRAVVDEVDEYSGHAHILLAAMEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIE
NKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCSTCADTLRYQANNCPICR
LPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDDHSTSEHIPPGFEPVSLLEALNGLR
SISPSIPSAPLYEEISYSGIGDGLCTSSRQLSTMDKIIDNCPQKPKLSKSSESSLRSPSS
PIQEEDEEKLSEDSDILLQKNGPQQPNMSSSQEVSVFQNTTIAETPEIEAQDQIDRTYSE
EIVQDSNNEHNRHTEEDGDTRLEMTLPGTSDSTESLKSQSTNSSSQPLLAVSSTVHIEDE
NQIA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattgtgtatcaaatggaatggagaagcatgctggaggaaattactttgcaagt
catttcttcatgggtggtgagaagtttgatacgccacatcctgagggatacctgtttggt
gaaaatatggacttgaatttcttgggaaaccgccctgtacagtttccatatgtgacgcca
gctgctcatgagcctgtgaagaccttacgcagtttggttaatattcgaaaagactctctt
cgcttggtcaggtacaaagatgaagctgacagtctgacggacgagaatgcaaagccaaaa
gtgctctacagtgtggagtttacctttgatgctgatgcgcgtgttgcaataaccatctat
tgtcaggcaacagaggaattccagagtggtatggcagtatatacatcaaagtacccttgc
atgcattctgagaccatccattataagcgaggtgtgagccagcagttctcacttccttct
tttaagattgacttctccgaatggaaggaagacgagttaaactttgatctagacaaagga
gtttttcctttggtcattcgggcagtggttgacgaagtagatgaatactctgggcatgcc
catattctattggctgcaatggaaaaacacgttgatggaagtttttctgtgaagccatta
aagcaaaagcagattgttgaccgagtcagctatctgctacaagaaatatacggcattgaa
aataagaataatcaagaaacaaagccttctgatgatgagaacagtgacaacagcaatgag
tgtgttgtatgcttgtctgacctacgtgataccttaatcttaccctgtagacatctgtgc
ttgtgcagcacctgtgcagacaccctccgataccaggctaataactgtccgatctgcaga
ttgccatttcgagcattgttgcagatccgagctgtgaggaaaaaacccggggccttgtca
ccagtttcatttagtcctgtcttagcacagactatggaccatgatgatcattctacatct
gaacatattcctcctggatttgagccggtttccttactggaagctttaaatggacttcgt
tcaatttctccatctattccttctgctcccctttatgaagaaatcagttattctgggatt
ggggatggtttgtgtacatcaagcaggcagctgtccacaatggacaagataatagataat
tgtccgcaaaagcccaaactgagcaaatcttcagaaagcagtctgcgctctccatcttct
ccaatacaagaggaggatgaagaaaagctttcagaagattccgatattctgctgcagaag
aatggaccacaacagcccaatatgtctagttcacaagaagtttctgtttttcagaatact
acaattgcagaaaccccagaaattgaagcacaagatcaaatcgatagaacgtactctgag
gaaatagtacaagatagcaacaatgagcacaatagacatactgaggaagatggggatact
cgtctagaaatgaccctgccaggaacctcagactcgactgaaagcttgaaaagccagagc
actaacagttcatcccagcctcttcttgctgtctccagtacagttcacatagaggatgag
aaccagattgcttga
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