Rhincodon typus (whale shark): 109913839
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Entry
109913839 CDS
T06055
Symbol
hspa5
Name
(RefSeq) endoplasmic reticulum chaperone BiP
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03060
Protein export
rtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
109913839 (hspa5)
04141 Protein processing in endoplasmic reticulum
109913839 (hspa5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rtp03110
]
109913839 (hspa5)
04131 Membrane trafficking [BR:
rtp04131
]
109913839 (hspa5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109913839 (hspa5)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
109913839 (hspa5)
Chaperones and folding catalysts [BR:
rtp03110
]
Heat shock proteins
HSP70 / DNAK
109913839 (hspa5)
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
109913839 (hspa5)
Autophagy
ER-phagy
ER stress-related proteins
109913839 (hspa5)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109913839 (hspa5)
Exosomal proteins of other body fluids (saliva and urine)
109913839 (hspa5)
Exosomal proteins of colorectal cancer cells
109913839 (hspa5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FtsA
CC_BshC
FGGY_C
HMG-CoA_red
ParM_N
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
109913839
NCBI-ProteinID:
XP_020368981
LinkDB
All DBs
Position
28:complement(24455099..24462874)
Genome browser
AA seq
650 aa
AA seq
DB search
MRGYLLLLLISSVFADEDDKRESVGTVVGIDLGTTYSCVGVYKNGRVEIIANDQGNRITP
SYVAFTPDGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPAVQQDVKYLPFKVIEKK
NKPHVQLDISGEVKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQAT
KDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEV
VATNGDTHLGGEDFDQRVMEHFVKLYKKKTGKDVRKDNRAVQKLRREVEKAKRGLSSQHQ
ARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVMEDADLKKTEIDEIVLVGG
STRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGEEDTGDLVLLDVCPLTL
GIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDL
TGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVND
AEKFAEEDQKLKERIDARNDLESYAYSLKNQIGDKEKLGGKLSTEDKEVIEKAVEEKIEW
LESHQDSDIEEFKAKKKELEEIVQPIISKLYGSAGGPPPEEEEETEKDEL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagaggatatttgcttctgctgctaatcagcagtgtctttgctgatgaggatgataag
agagagagtgttggtactgtggttgggattgaccttggtactacttattcttgtgttggt
gtctacaaaaatgggcgtgtagaaattattgccaatgatcagggaaaccgaatcacccca
tcgtatgtggccttcacacctgatggtgaacgtctgataggtgatgctgcaaaaaatcag
ctgacctctaatccagagaacactgtttttgatgccaagcgtcttattggacgaacctgg
aatgacccagcagtacagcaagatgtcaaatacttaccttttaaggtgattgaaaagaag
aacaagcctcatgtccaacttgacatttctggtgaggtcaagacgtttgctccagaggag
atatctgccatggtattgactaagatgaaagaaactgctgaggcttaccttggcaagaag
gttacacatgctgtggtaacagtaccagcttacttcaatgatgctcaacgtcaggctaca
aaggatgctggtactattgctggtttgaatgtcatgaggatcatcaatgagccaactgct
gctgcaattgcctatgggctggacaagcgagagggtgaaaagaacattctggtgtttgac
cttggtggtggtacttttgatgtgtcactgcttactattgacaatggtgttttcgaagta
gttgctacaaatggtgacactcatctaggtggtgaagattttgaccagcgtgtgatggaa
cactttgtcaagttgtacaagaagaaaacagggaaagatgttcgaaaggataacagagct
gtacagaaactccgccgtgaagttgaaaaagccaaacgtggtttgtcttcccaacatcaa
gctagaattgaaattgaatctttctttgagggtgaggatttctcggaaactttaacacgt
gcaaaatttgaagaactgaatatggacctcttccgatcaaccatgaagcctgtacagaaa
gtgatggaagatgctgatctgaagaaaactgaaattgatgaaattgtacttgtgggtggc
tccactcgcattcctaaaattcagcaactggtgaaggagtttttcaatgggaaggaacca
tctcgtggaatcaaccctgatgaggctgtggcatatggtgcagcagtgcaggctggtgtt
ctatcaggagaggaagatactggtgatcttgttcttctggatgtttgccccttgactctt
ggaattgaaactgttggtggtgtcatgaccaagttaataccacgtaatactgtggttcca
actaaaaagtctcagattttctcaactgcttctgacaaccaacctactgtaacaatcaag
gtctatgaaggtgagcgtccactgaccaaagataatcacctgcttggtacctttgaccta
actggtattcctccagcacctcgtggtgttcctcagattgaagtcacatttgaaatagat
gtaaatggcatcctacgtgttacagctgaagacaaaggtactggaaataaaaacaagatc
actattacaaatgaccagaaccgtctgaccccagaagaaattgagagaatggtgaatgat
gcagagaaatttgctgaagaggatcaaaaactcaaagaacgtattgatgccagaaatgac
ctggagagctatgcctattctctgaagaatcagattggtgataaagagaaacttggtgga
aagctgtcaacagaggacaaagaagttattgagaaagctgtggaggaaaagattgagtgg
cttgaaagtcaccaagattctgacattgaagaattcaaagctaagaagaaggaacttgaa
gaaattgttcagccaattataagtaagctgtatggaagtgcaggtggacctcctccagaa
gaagaagaggagactgaaaaggatgagttgtaa
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