Rhincodon typus (whale shark): 109913861
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Entry
109913861 CDS
T06055
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109913861 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109913861 (dis3l)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109913861 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
OB_HELZ2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
109913861
NCBI-ProteinID:
XP_048471957
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All DBs
Position
33:complement(33411529..33459536)
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AA seq
1058 aa
AA seq
DB search
MAPPLVYDSVMIKTEKVLHLRSCKGKSVRVVREHYLRQSVPCNSSLCQAECHNEGKLLSE
SATHYVIPDWKVVQDYLEILEFPELRGIVFMQTACQAVQHQKGRRHYNKLRNLLKDARHE
CVLFFNEFQLYSYVPRDQGESLEKWQTRCIYYATVWYYNHLAGLMPVVMVTEDPEAIQKY
GSETDGVFVVSFKSYLENFWPDLEAVHQLYDSIVQSRKERESENQEKNGKEYSEHLPLEI
LEAGIKSGRYVQGVLNVNKHRSQLEAFVRTQGFTNKKSELEMDILICGTKARNRAIQGDV
VAVELLPRNEWKGRVSVLCENESEEKTAEETESEPMATGKVVGIIQRNWRDYVASFPPKE
DIQSQGKNVRKILVTPWDYRIPRIRISTQQAESLQNCRIIVRIDSWDSTSLYPNGHFVKV
LGRAGDLETEIAAILVENSISVSPFSEAQLREMPVNTPENPWKVDTEEQAQRVDLRNTHL
VFSIDPKGCEDVDDALSVRRLANDNLELGVHIADVTHFVKFNSYTDLEARSRATTCYLAD
RRYDMLPSILSADLCSLLGGADRYAVSVLWELDKTNYEVVKVWFGRTIIKSAYKMYYEAA
QALLDGELRVMDDIPELKGREEKDKHRILNDLIWAIEKLTDIARHIRAKRALGGALELEG
IELRVQLDEKKNISDLVPKQPLEVHQTVAECMILANHWVAKKITENLPHQALLRRHPPPQ
QEFFTELIDCAKAKGFKIDTRSNKALADSLDMAEDPDDPEVNKLLRSMATQAMSNALYFS
TGSCTEDEYYHYGLALEKYTHFTSPIRRYADIVVHRLLMAAIKKDEKLEPEDSLLSNKAL
TELCQHINNKNRAAQCVQKQSIELFQCMYFKDKDPSDERCIADGIIYSIRANGVLVFVPR
YSIKAPAFLKNKEGLVISAHPDGSCVWKPGFLKRLRDKIISTTVDGGSVTFSLFDHITVR
ISELSSRSHPDSIKLDIINNQPYSRTNTEPMHEPSHSSKTDLIRDVIRSVEEAQLAQEHA
KSTSVRDEDKEYCQTKGNSLYLLLEEIKELALLDVTVG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccgcttgtttacgacagtgtaatgataaaaacggagaaggtgctgcacctg
aggagctgcaaagggaaatcagttcgagttgtgagggagcattacctcaggcagtcggtt
ccctgtaacagttccctgtgccaggctgagtgccacaatgaagggaaattgttgtcagaa
agtgcaactcattatgtgatacctgactggaaagtggtgcaggattatttggagatactt
gagtttccagaattgagaggcattgtcttcatgcagacagcttgtcaggctgtccaacac
cagaagggacgcagacattacaacaaactgcggaacctgctgaaggacgctcgtcatgaa
tgtgtgttgttcttcaatgaattccagctgtactcctatgtaccaagagatcagggagaa
tctctagaaaaatggcagaccaggtgcatttactatgccacagtgtggtattataatcat
cttgcaggattgatgccagttgttatggtaacagaggatccagaagccattcaaaaatat
ggaagtgaaacagatggagtatttgtcgtatcatttaagagttatttggagaacttttgg
cctgacttagaagctgtacatcagttgtacgattctattgttcagtctcggaaagaaaga
gaaagtgaaaatcaggaaaagaatggaaaagaatattcagaacatctccctcttgaaata
ctggaagctggcatcaaatctgggagatatgtgcagggtgttttaaatgtaaacaaacac
agatctcaattggaagcctttgttcgtactcaaggattcactaacaaaaaatcagaacta
gaaatggacattctcatctgtggcactaaggcccgaaatcgtgccattcagggtgatgtg
gtggctgttgaattgctaccaaggaatgaatggaaggggagagtttctgtgttatgtgag
aatgaatctgaagagaagactgctgaagaaactgaaagtgaaccaatggctacgggtaaa
gttgttggaattattcagaggaactggcgagattatgttgcatcctttccacccaaagaa
gatatacaatctcagggtaaaaatgttcggaagatcctagtgacaccttgggattataga
attcctagaataaggatcagcactcagcaagctgaatccctgcagaattgccgaattatt
gtacgcattgattcctgggattctacttctctttatcctaacggacactttgtgaaggtt
cttggaagagctggtgaccttgagacagaaattgcagctattcttgttgaaaacagcatt
tcagttagccctttctctgaagcccagctgcgtgagatgccagtgaacactcctgagaat
ccttggaaggttgatacagaggagcaagcccagcgagtggatttaaggaatactcatctg
gtgttcagcatcgaccccaagggttgtgaggatgtggacgatgcattgtctgttcgcaga
ttagctaatgacaacctagagctaggggttcacattgctgatgttacacactttgtcaaa
tttaattcatatacagatctggaagctcgatcaagggcaacaacttgttacctagcagat
cgtcgctatgacatgttaccttctatcctgagtgctgatctgtgctctttacttggaggt
gctgacaggtatgcagtaagtgtattgtgggagttggacaaaactaactatgaggtcgtt
aaagtgtggtttggacgaacaattataaagtctgcatacaagatgtactatgaagctgcc
caggccttgttggatggggagctccgtgttatggatgatatccctgagctcaaaggacgt
gaagagaaagacaaacatagaatattaaatgacctcatatgggctatagagaagctgact
gacatagctcgccacattcgagcaaaacgtgcacttggtggtgcactggagctggagggc
attgaattacgagtgcagttagatgaaaagaagaatattagtgacctggtcccgaagcag
ccactggaagtgcatcagactgtagcagagtgtatgattctggctaaccactgggtggca
aagaagataactgagaatttacctcaccaagccttgctgcgtcgtcatcctccaccacag
caggaattcttcactgagctaattgattgtgcaaaagcaaagggattcaaaattgataca
cgctccaacaaggctctggcagattccctggatatggcagaagatccagatgatcctgag
gtgaataagctgttacgatccatggccacgcaggcaatgtccaatgctctttatttttct
actggctcctgcacagaggatgaatattatcattatgggcttgctctggaaaaatatact
cacttcacttctccaatcagaagatatgcagacatagtggtgcatagactactaatggca
gctataaagaaggatgagaaattggaaccggaagattccttactcagcaacaaggcttta
acagaattatgtcagcacatcaacaacaagaacagggctgcacaatgtgtgcagaagcaa
tctattgagttatttcaatgcatgtactttaaggataaagatccttctgatgagcgttgc
atagcagatggcatcatatactcaattcgggcaaatggcgtgctggtatttgtaccaagg
tacagcataaaagctccagcattcctgaagaataaagagggtcttgtgatctcagcacat
cctgatgggtcctgtgtctggaaacctggcttcctcaaacgccttagggacaaaattatt
tccactacagtggatggaggatcagttactttctctctgtttgatcacatcactgtaaga
atatctgaactctcatcccggtcacatcctgacagcatcaaactggacatcatcaacaac
caaccttatagtagaaccaacacggaacctatgcatgaaccctcacacagttcaaagact
gacttgatacgggatgtaatcagatctgttgaagaggcacaacttgctcaagagcatgca
aaaagtacatcagtcagagatgaagataaggaatattgtcaaaccaagggcaacagcctc
tatctgttattagaagaaattaaggaactggcacttctggatgttacagtcggatga
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