Rhincodon typus (whale shark): 109913865
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Entry
109913865 CDS
T06055
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 6 isoform X1
KO
K08399
leucine-rich repeat-containing G protein-coupled receptor 6
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109913865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109913865
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Others
R-spondin
109913865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_LRWD1
LRRNT
LRR_R13L1-DRL21
LRR_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
109913865
NCBI-ProteinID:
XP_020369014
LinkDB
All DBs
Position
25:26094997..26330116
Genome browser
AA seq
972 aa
AA seq
DB search
MTEARKNVFTRRMLLPCLVLALAAFGYVPSSQAPMIPSCPARCHCEEDGILLWVDCSELG
FTALPEDLSPLTSYLDLSMNNINELQLNAFGDLHFLEELRLSGNHLAQIPMHAFAGLYNL
KVLMLQNNQLKRLPSEALWDLPNLQSLRLDANLISDIPQNSFEGLHSLRHLWLDDNALTH
IPVRALNNLPSLQAMTLALNKIAHIPDYAFVNLSSLVVLHLHNNNIQSLGRNCFDGLHSL
ETLDLNYNDLAEFPVAIRTLSKLQELGFHNNNIKAIPEKAFVGNPLLQTIHFYDNPIQFV
GKSAFQYLPKLHTLSLNGAIEIKEFPDLKGTTSLEILTLTQAGITSLPRGLCQQLPNLRV
LELSYNQIHVLPSFHNCQKLEEIGLQHNRITEIRADTFQQLMALRSLDLSWNNIDFIHLD
AFASLRSLRKLDLTFNQLSSLPLSGLSGLTHLKLKGNLALSESYSEESFPKLRVLEMPYA
YQCCAYGSCKNNYKQSNLWDAETTLSDDEDVQKRTMGVFPVPPDSNFYLDMDDFQLDVDD
SKLHPSIQCTPVPGPFNPCEYLFESWIIRLGVWGIVLISVICNGLVIATIFASSSYLSPV
KFVIGLIAGANMLTGLYSGTLAIVDAMTFGQFAKHGVKWETGLGCRITGFVSVFSSEASI
LFLTLAAVQCSISVSCVRAYGKSPSFSSVKIAAFCCMVLSFSAAALPLFSVGEFGTSPLC
LPSPIPDGKPSTLGFMVALIMMNILCFLVITGTYTKLYCDLMKGEFDSIWDCAMIKHVAW
LIFTNCILYCPVAFLTFSSLLNLFLISPEVIKSILLLVLPLPACLNPLLYLLFNPHFKED
LRILREYKWQKRCRSKQGSIDSLTSEDMDKQSCDSTLALMTFADNEIILDSTDGLGVLSS
HRKMMEAYPFPPVTLIPCQQRKGNGKEESYSTRQSFLTDEELLITSEKTEQAHNNIQISF
YPTKGPSFTSHV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggctcgaaagaatgttttcaccaggagaatgctcttgccctgcttagtgctg
gccctagctgcctttggctatgttccctccagccaagcgccaatgattccttcttgccca
gctcggtgccactgtgaagaggatggcattctgctgtgggtcgattgctcagagctcggg
tttacagcattgccggaagacttgagcccgttgacgtcctaccttgacttgagcatgaac
aatattaatgaactacagctgaatgcttttggagatcttcatttcttggaagaactacgg
ctctctggaaatcaccttgcacagatccccatgcatgcttttgctggcctctacaatctg
aaagtcctaatgctacaaaataaccagctgaagagactcccaagtgaggcattatgggac
cttcccaacctccaatcgctacgtctggatgcaaatctgatttcagacattcctcagaac
agctttgaaggattgcactccctgaggcatctttggcttgatgataatgcattgactcat
attcctgttcgagctctcaacaacttgccatccctccaggcaatgactctagctctcaac
aaaatcgcacatatccctgattatgcatttgtcaacctatccagcctggtggtattacat
ctccataacaacaatattcagtctcttggaaggaattgctttgacggactccacagtttg
gaaacactagacttgaattataatgacctggctgaatttcctgtagctatcagaactcta
agcaagcttcaagagctgggtttccataacaacaatatcaaagcaattccagaaaaggct
tttgttggaaatccccttcttcaaacaattcatttttatgataatccgatccagtttgtg
gggaaatcagcctttcagtatctgccaaagcttcacaccttgtcactaaatggagcaatt
gaaataaaggaattcccggaccttaaaggaacaactagcctggaaatactgaccctaact
caagctggaataacctcccttcccaggggtctctgccaacagctcccaaatctacgagta
ctggaattatcatacaatcaaattcatgtgctgccaagtttccacaactgtcagaagctt
gaagaaattggcctacagcataatagaatcactgaaatcagagctgacacgtttcaacag
ctaatggctctgcgatctctagacctgagttggaacaatatcgactttattcatcttgat
gcctttgcttcattacgttctttaagaaagttggatctgaccttcaaccaactttcttct
ctccctttgagtggcctgagtggattgacacatctaaagctcaaaggaaatctggcatta
tcagaatcctattcagaagagagctttcctaagctaagagtattagaaatgccatatgct
tatcagtgttgtgcatatggatcctgtaaaaacaattacaagcagtctaacctttgggat
gcagagactactctcagtgatgatgaagatgtccagaaaagaactatgggagtttttcct
gtcccaccagacagcaacttttacctggatatggatgacttccagttagatgtggatgac
tctaaactacatcccagtattcaatgcacacctgttccaggtccatttaatccatgtgaa
tatcttttcgaaagctggataatacgccttggagtttggggcatagttcttatctctgtg
atatgcaatggactagtcatcgcaactatatttgcatcatccagctatctatctccagtg
aagtttgtgattggtctgatagcaggagccaatatgttgacagggttgtacagtggcacc
ttagcaattgttgatgcaatgacttttgggcaatttgcaaagcatggtgtaaagtgggaa
actggcttgggctgcagaataactggatttgtgtccgtattttcctcagaagcatccata
ctgttcctgactcttgctgctgtccagtgcagcatttctgtgtcttgtgtccgtgcttat
ggaaagtcaccatctttcagtagtgtgaaaattgctgctttttgctgcatggtactatca
tttagtgcagctgcactgcctctgttctcagttggagaatttgggacttcacctctttgc
ctcccgtcacctattcctgatggaaaaccttccactctcggtttcatggtggctctaatc
atgatgaatatcctttgcttccttgttataactgggacatacaccaaactttactgtgac
ctaatgaaaggtgaatttgacagtatctgggattgtgccatgattaagcatgtagcttgg
ctaatcttcaccaactgtatcctatattgtcctgtggcctttctcacattttcttccctg
cttaaccttttcttaatcagtccagaagtaattaaatcaattctgctgctggtcctccca
ctgcctgcttgtttaaaccctttgctttatctgttattcaacccacatttcaaagaggat
cttcgcattctccgtgagtataaatggcagaaaaggtgccgatcaaaacaaggcagcata
gattccctcacttcagaagacatggacaagcagtcatgtgattccaccctagcactgatg
acctttgcggataatgaaatcattcttgattcaactgatggccttggagttctatcaagt
catcgtaagatgatggaggcctatccatttcctcctgtaactctaattccatgccaacag
aggaaaggcaatggtaaagaagagagctactcaacacgacagtctttcctcactgatgag
gagctcttgatcacttcagagaaaacggagcaagctcacaacaacattcagatcagcttt
tatccaaccaaaggaccttccttcacatctcatgtataa
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