Rhincodon typus (whale shark): 109913941
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Entry
109913941 CDS
T06055
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109913941 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtp01007
]
109913941 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109913941 (farsa)
Enzymes [BR:
rtp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
109913941 (farsa)
Amino acid related enzymes [BR:
rtp01007
]
Aminoacyl-tRNA synthetase
Class II (U)
109913941 (farsa)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109913941 (farsa)
Prokaryotic type
109913941 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
109913941
NCBI-ProteinID:
XP_048473769
LinkDB
All DBs
Position
38:complement(7730757..7774420)
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AA seq
526 aa
AA seq
DB search
MANADWSSRTSWRPGLSTNGRRPHVRSAEEAGREPPTAGARSPLVDAAFNQIESQRIRCS
SPTPATPETRFEFAKQLKVIEAELRSSKRWELTDEGKEIVEKGSHEARVFDAIPPNGITQ
SDLMKLPSGKVGFNKAMSSKWIRIDKNAEGGPRIFKATDCIEDAVKNKLLLVQQGKDSKL
DDKEKNELKKRKLLSEVTVKTYWITKGSSFSTTVVKQDTELTPEMIANGSWKEKKFKPYN
FDAMGIVPECGHLHPLMKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDSLFQPQQHPAR
DQHDTFFLSEPATATKFPMDYLERVKKVHSEGGYGSLGYKYDWKIEEAQKNLLRTHTTAV
SARMLYKLAQKEEFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADYDLTLGDLMGVL
QQFFSKLGITKLRYKPAFNPYTEPSMEIFSYHEGLKKWVEVGNSGVFRPEMLLPMGLPEN
VTVIAWGLSLERPTMIKYGINNIRELVGHKVNLQMVYDSPVCRLDP
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgctgattggtcgtcccgaacgtcatggcgaccggggctctcgaccaatggg
cgacgaccacatgttcggtcggcggaagaagcggggcgggaaccgcccaccgcaggagct
cgctccccattggtggacgcggctttcaatcagattgagtcacaaaggatacgttgctcc
tcccctactcctgcaactccagagacaaggtttgagtttgcaaaacagctgaaggtgatt
gaggctgaactgcgatccagcaagcgttgggagctgactgatgaagggaaagagattgtg
gagaaaggcagtcatgaagctcgggtttttgatgctattccaccaaatggaattacacag
agtgacctgatgaaactcccaagtggaaaagtgggattcaacaaggccatgtccagtaaa
tggatacgcatagacaagaatgccgaaggaggacctcgcatctttaaggctactgattgc
attgaagatgctgtcaaaaacaagttgctgctggtccaacaggggaaggacagcaaactg
gatgataaggagaagaacgaattaaaaaagagaaagctgctcagtgaggtgaccgtgaag
acctactggatcaccaaaggaagctcattcagcaccacagtggttaagcaggatactgaa
cttaccccggagatgatagccaatggatcttggaaagagaagaagttcaagccgtacaac
tttgacgcaatgggtatcgttccagaatgcggccacctgcaccccttgatgaaagtccga
acacaattccgacagatatttctggaaatgggtttcacagagatgccaaccaataacttc
attgagagctcattctggaactttgactccctctttcaacctcagcaacacccagcccga
gaccaacacgacaccttcttcctatctgagccagccactgcaacaaaatttccaatggat
taccttgaaagagtgaagaaagttcattcagagggcggatatggatccctgggatacaaa
tatgactggaagattgaggaagcacagaagaatctcttgcgaacgcacacaacagcagtc
agtgcacgaatgctgtacaaacttgcccaaaaggaagagtttacacccgtgaagtatttc
tctatcgaccgagtcttccgtaatgaaacactggatgctactcacttggcagagtttcac
caaattgagggggtcgtagcagattatgatctgaccctgggtgatctgatgggagttctc
cagcagttcttcagtaaacttggtataaccaaactgcgttataagccagccttcaacccc
tacacagaacctagtatggagatcttcagttatcatgaaggattgaagaagtgggtggaa
gtcggaaattctggggttttccgtcctgagatgctgctcccgatgggtctgccagaaaat
gtgacggtgattgcctggggcctctcactcgagcggccaaccatgatcaagtatggcatc
aacaacatccgcgagctggtgggacataaggtgaacctgcagatggtgtacgatagccca
gtatgccgcctggatccctag
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