Rhincodon typus (whale shark): 109913951
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Entry
109913951 CDS
T06055
Symbol
rnf34a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34a
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109913951 (rnf34a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
109913951 (rnf34a)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
109913951 (rnf34a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
HeH
DUF4518
Prok-RING_4
FYVE
zf-C3HC4_2
zf-RING_5
SDE2_2C
DUF1652
DUF7573
Motif
Other DBs
NCBI-GeneID:
109913951
NCBI-ProteinID:
XP_020369103
LinkDB
All DBs
Position
24:23814099..23837392
Genome browser
AA seq
340 aa
AA seq
DB search
MWASCCGLLNEVMGTGTVRGQQPGFSGGTGPFRFAHSTGYSSYPSPMPEVQNIVCKGCGQ
AFSLFRKKYVCKDCKKNFCSFCSVMQESLRRCYTCQVLQQTSFQRNELMKIKVKDLRQYL
TLRNIPIETCREKEDLVQLVLSHHESDADGSDTENIRSPRSESSQFYTTPPSSASASAAS
SSQGISSNERPTSGTPNMHQANEIIPPKKTRASLSDLSSTEDIEALTVRQLKEILARNFV
SFSGCCEKWELVERVKRLFKETEENRKFLENGNNPDVAAVEEQLQFSSDENLCRICMDAV
IDCVLLECGHMVTCTKCGKRMNECPICRQYVVRAVHVFKS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcttcatgttgtggtctgctgaatgaagtaatgggtactgggacagtgcgtggc
cagcaacctgggtttagtggaggtacaggtccgttcagatttgcccacagcacaggatac
tcttcatatccctcaccaatgccagaagtccaaaatatagtctgtaaaggctgcggacag
gccttttctctttttaggaagaagtatgtatgtaaggactgcaagaagaatttctgttcg
ttctgttcagtaatgcaagaaagtctacgaagatgctatacgtgccaagtgttacaacag
acttccttccagcgtaatgagcttatgaaaataaaggttaaagatctacgccagtatcta
accttaagaaatatacccatagaaacatgtcgtgaaaaagaggacttagtacagcttgta
ttgagccatcatgaatcagatgctgatggatcagacacagagaatattcgttcaccaagg
tctgagagttcacaattttatactacccctccttcctctgcatcagcatcagcagcatca
tcttctcaggggatttcctccaatgaaagacccacctcaggaactccaaacatgcatcag
gcaaatgaaatcattccacccaaaaaaacaagagcctcattgtcagacctatccagtact
gaagatattgaagcattgactgttcgtcagctgaaggaaatactggcacgcaactttgtc
agcttttcagggtgttgtgaaaagtgggaattagtggaaagagtgaagagattattcaaa
gaaacagaagaaaatcgcaagttcttggaaaatggaaataacccagatgtagctgcagtt
gaagaacagctgcagttcagcagtgacgagaatctctgcaggatctgtatggatgcagtg
atcgattgtgttctcctcgaatgtggtcacatggtcacttgcactaaatgtggaaagcgc
atgaacgaatgccctatttgtcgacagtatgttgtacgggcagtacatgtctttaaatct
taa
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