Rhincodon typus (whale shark): 109913993
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Entry
109913993 CDS
T06055
Symbol
ago3b
Name
(RefSeq) protein argonaute-3
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109913993 (ago3b)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109913993 (ago3b)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109913993 (ago3b)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109913993 (ago3b)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109913993 (ago3b)
microRNA pathway
RISC loading complex
109913993 (ago3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
bpX4
Motif
Other DBs
NCBI-GeneID:
109913993
NCBI-ProteinID:
XP_048468795
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Position
27:24521235..24612799
Genome browser
AA seq
852 aa
AA seq
DB search
MGKPIKLLANCFQVDIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKVQIFGERRPV
YDGKRSLYTADPIPVSTTGVDLEVTLPGEGKDRIFRVSIKFVSRVSWHLLHEVLTGRSMP
ELLPGLDLDKPLSTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGF
HQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEI
KDKLLTGLKVEVTHCGPMRRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYN
LQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQE
EISKLVKSANYDDDPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRVEPSHFRLQTNRTV
ATPSHGVWDMRGKQFHTGVEIKMWAIACFAAQRQCREEVLKSFTDQLRKISKDAGMPIQG
QPCFCKYAQGADSVEPMFRHLKNTYSGLQLVIVILPGKTPVYAEVKRVGDTLLGMATQCV
QVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGK
KPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFY
RDGVSEGQFRQVLYCELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADKNERVGRS
GNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFSADELQLLTYQLC
HTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHISGQSNGRDPQALAKAVQ
IHQDTLRTMYFA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaccgattaaactgctggccaactgcttccaagtagatatcccaaagattgac
gtctacctctatgaggtagatattaaaccagataaatgtcctcgcagggtaaacagggaa
gtagtcgactctatggtccagcattttaaagttcagatttttggagaaagaagacctgtc
tatgatgggaaaaggagtctttacactgcagatcccattcctgtcagcaccactggagtg
gatttggaggtgacattaccaggagaagggaaggaccgaattttcagagtgtcaatcaaa
tttgtttcaagagtgagctggcatttgctgcatgaagttctaacaggtcgtagcatgcca
gagctgctgcccgggttggacctggacaaaccactcagcacaaatcctgtacatgctgtc
gatgttgtcctccgacacctcccttccatgaagtacacccctgttggccgctctttcttc
tctgcacccgaaggttatgaccatcctttaggtggaggtagagaagtctggtttggtttc
catcaatctgtcagaccagccatgtggaaaatgatgctgaacatagatgtttctgccact
gctttttataaagcacagcctgtaattcagttcatgtgtgaagttctagacattcataat
attgatgaacagccacgacctttgactgattcccacagagtcaaattcaccaaagagata
aaagacaaacttctcacaggattgaaggttgaagtaactcattgtggacctatgcggaga
aagtaccgtgtgtgtaatgttaccagaagaccagctagccatcagacgttccccttgcag
ttggaaagcgggcagactgtggagtgcacagtagcacaatatttcaaacagaaatacaac
cttcagctaaagtacccacatctaccctgtttacaggtgggacaggaacaaaagcacacc
tacctgccacttgaggtgtgcaacattgttgcggggcagcgctgtatcaaaaaactgaca
gacaatcaaacatcaaccatgattaaagcaacagcacggtcagcacctgacagacaagag
gagattagtaaacttgtaaaaagtgcaaactacgatgacgatccatttgtccaggaattt
cagtttaaagtgagagatgagatggctcatgtcactgggcgagtacttcccgctcccatg
ctgcagtatgggggaagggtggaaccaagtcatttcagattacaaactaatcgaacggtt
gctactccaagtcatggtgtttgggacatgagggggaaacagttccacaccggggttgaa
atcaaaatgtgggcgatagcatgttttgcagcacagagacaatgtagagaagaagtactt
aagagttttactgaccagttgcggaaaatatcgaaagatgcagggatgcctatccagggc
cagccatgtttctgtaaatatgcacaaggagctgacagtgtggaaccaatgtttcggcat
ctgaagaacacctattcaggactccagctcgtcattgttattctacctgggaaaacacct
gtctatgctgaggtaaaacgtgtgggagatactctgctgggaatggctactcagtgtgtt
caagtgaagaatgttgttaaaacatctccacagacgttatcgaacctctgcctgaagatt
aatgtgaaactaggcggtattaacaacattctggtgccacatcagcgaccatccgtattc
cagcagcctgtgatttttttgggggctgatgtcacacacccaccagctggagatggcaag
aaaccctcaattgctgctgttgtgggcagtatggacgcccatcctagtcgttattgtgcc
actgtgcgtgttcagagacctcgacaggagatcattcaagacctagcttcaatggttcga
gaacttctcatccagttttacaaatcaacccgcttcaagcccactcgaattatattctac
cgagacggtgtttctgaggggcaattccgtcaggtattgtattgtgagctattggcaatt
cgagaagcctgcatcagcctggaaaaggactatcagcctggcatcacatacattgttgtg
cagaaacgtcatcacactcgattgttctgcgctgataagaatgagagggttggaagaagt
ggaaatattccagcaggaacaactgtagacacagatatcacccacccatatgaatttgat
ttttatctctgcagccatgctggaatacagggtacgagtcgcccctctcattaccatgtt
ttgtgggatgacaactgcttctctgcggatgaacttcagctcctcacctaccagctatgt
cacacttatgtgcgctgcacacgctcagtctctatcccagcaccagcctattatgcacat
ctagtggcatttagagcaaggtaccacctggtggacaaagagcatgacagcgctgaaggc
agtcacatttctggacagagtaacggacgtgacccgcaggctcttgccaaggctgtgcag
atccaccaggacaccttacgcacaatgtacttcgcttga
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