Rhincodon typus (whale shark): 109914001
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Entry
109914001 CDS
T06055
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6 isoform X1
KO
K10154
interferon regulatory factor 6
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109914001 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109914001 (irf6)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109914001 (irf6)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109914001 (irf6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
IceA2
Motif
Other DBs
NCBI-GeneID:
109914001
NCBI-ProteinID:
XP_048468166
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Position
25:16323893..16342519
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AA seq
480 aa
AA seq
DB search
MLTDRGPFSVKENISGITKLDIDEKSMAIHPRRVRLKPWLVAQVDSGLFPGLVWLHRENK
RFQIPWKHATRHSPPQEEENTIFKAWAVETGKYQEGIDEPDPAKWKAQLRCALNKSREFN
LIYDGTKEVPMNPLKIYEVCDIPQSSGTHSNPGSVPWEESLDLEDEDDELSSSQPQVKMQ
ESFPFPNLNASPIAAANVTSCSPNEWIKTEPEQVDPHLPAEIFSTPETWISSLPMTDLEI
QFQYRGKELGPVLNVSNPQGCRLFYGDLGPMPNQEELFGPVSLEQVKFPGTDHISNEKQR
LFTNRLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCASGNNTPHVIERQKKVKLFCL
ETFLSDLIDLQKGQSNKVPPFEIYLCFGEEWPDGKPKERKLIMVQVVPVVARMIYEMFNG
EFTRSFDSGSIRLQISTPDIKDNIVTHLKQLYHLLQTNQGHEPWQIQPPNLHVAQPLPTQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgataggggacctttctctgtaaaggagaacatttccgggatcaccaagctg
gatatcgacgagaagagcatggcaatacatccacgcagggtgcgattgaaaccatggttg
gtggcccaagtggacagtggtcttttcccaggtctcgtttggctccaccgggaaaataaa
cgttttcaaattccttggaaacatgcaactcgtcacagtccacctcaagaggaagaaaac
actatttttaaggcatgggcagtagaaactggaaagtatcaagaagggattgatgaacca
gatccagccaagtggaaagcgcagcttcgttgtgcacttaacaaaagtcgggaatttaac
ctaatttatgatggaaccaaggaggttccaatgaatcctcttaaaatatacgaagtgtgt
gatatcccgcagagcagtggtacccacagcaatccaggatcggtaccatgggaagaaagt
ctagatttggaagatgaagatgatgagttgagctcttctcagcctcaagttaaaatgcaa
gaaagctttccatttcccaatttgaatgcctctccaatagccgcagcaaatgtgactagc
tgctctccaaatgagtggataaagactgagccagaacaggttgatccgcatttaccagct
gagatattcagcactccagaaacctggatcagctccctgcccatgacagacttggagatc
cagttccaatacagaggcaaagaattgggacctgtcttaaacgtcagcaatccacaaggg
tgccgtctcttttatggtgatctgggtccaatgccaaaccaagaggagttatttggtcca
gtttcccttgaacaagtgaaatttcctggaacagaccatatttcaaatgaaaagcaacgt
ctcttcacaaaccgcctattagatgtgatggaccgaggactaatcctggaagtgagtggt
catgccatctatgccatcaggctgtgccagtgtaaggtgtattggtcaggaccctgtgca
agtggaaataatacgccacatgtcatagaacggcagaagaaagtcaagctgttttgttta
gaaacgttcttaagtgatctgattgaccttcaaaaagggcaaagtaataaagtaccgcct
tttgagatttacctgtgctttggggaagagtggccagatggcaagcctaaggaaaggaaa
ctaatcatggtgcaggttgtgccagttgttgcacggatgatttatgagatgttcaatggt
gaattcacacgttcttttgatagtggcagcatcaggctgcagatctcgaccccagacatt
aaagataatattgtgactcacctgaagcaactgtaccatctcttgcaaacaaaccaagga
catgagccatggcaaattcaacctccaaacctgcacgtggcacaacctctgccaacccag
taa
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