Rhincodon typus (whale shark): 109914035
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Entry
109914035 CDS
T06055
Symbol
chrne
Name
(RefSeq) LOW QUALITY PROTEIN: acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109914035 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109914035 (chrne)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
109914035 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
FAM176
Motif
Other DBs
NCBI-GeneID:
109914035
NCBI-ProteinID:
XP_048476214
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Position
45:complement(2148667..2180798)
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AA seq
513 aa
AA seq
DB search
MALSSHKXLLVLCWTIVLSARSNEEEKLLNTLLGNYDKRIRPAKFYGDIIDVTLKLTLTN
LISLKEKEETLTTNVWIEIQWKDYRLSWNSSNYAGIDLVRIPSQQIWLPEIVLENNIDGG
FEIAYYANVLVSSDGSIYWLPPAIYRSACPITVTYFPFDWQNCSLVFRSQAYNAREINLE
LSEEDGTLIEWIHIDPEDFTENGEWTIKHKPAKRHINSQFSMDDIEYQEIIFFLIIQRKP
LFYVINIIIPCVLISSLVVLVYFLPAQAGCQKCTLSISVLLAQTVFLFLIAQKIPETSLN
VPLIGKYLIFVMIVCTLIVTNCVIVLNVSLRTPNTHSMSEKIKQVFLELLPQYLGMHLES
PEDSLDTHQPRRRSSFGIMIKAEEYILKKPRSELMFERQRDRHGLKRVNKASAGSDIDIG
TTVDLYRNLAHFAPEIKTCVDACNFIAKSTKELNDFGSENENWILIGKVIDKACFWIALL
LFSIGTVTIFLTGHFNQAPEFPFPGDPRKYKPD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagttcgcacaagtaacttctggtgttgtgttggaccatagttttgtcagct
agatcgaatgaagaggaaaaactgctgaatacattgttgggcaattatgataagagaata
cgtcctgccaagttttatggtgatatcatcgatgtgactctgaaacttacattaaccaat
ctcatctcattgaaagaaaaggaggaaacacttaccacaaatgtatggattgaaattcaa
tggaaagattatcgattatcttggaacagttctaattacgcaggcattgatctggtaaga
atcccttcccagcagatctggcttcctgagatcgtccttgagaacaacattgacggtggg
tttgaaattgcttactatgctaatgttctggtctccagtgatggcagtatttattggctg
ccacctgctatctatcgaagtgcctgtccaattactgtgacgtactttcccttcgattgg
caaaactgttcccttgttttcagatcccaggcatacaatgcccgtgaaattaacttggag
ttatcagaagaggacggaacgctgatcgagtggatccatatagatcctgaagatttcact
gaaaacggagagtggacgataaaacacaaaccagcaaagaggcacattaacagtcagttc
tcaatggacgatattgagtaccaggagattattttcttcttgatcatccagaggaaacca
ctgttctatgtcattaacatcattattccctgtgtcctcatttcatcactggtagtcctg
gtctacttcctaccagcgcaagctggctgtcaaaaatgtacactttccatctctgtgctg
ctggcccagactgtctttctgtttttgattgcacagaagattccagaaacatcattaaat
gttccactcattggaaaatatttaatatttgtaatgattgtctgtactttgattgtaaca
aactgtgtcatagtcctaaatgtctccttgaggacaccgaacacccacagcatgtctgag
aagatcaaacaagtcttcctggagcttctgcctcagtatttgggcatgcacttggagtct
cctgaggattccttggacacacaccaaccaaggcgcaggagctcctttgggattatgata
aaagcggaggaatatattctcaaaaaaccacggagcgaactgatgtttgaaagacagcga
gataggcatggactgaagagagtgaacaaggcatctgcaggttcagacattgatattgga
accacagttgacctgtacagaaacctggctcactttgccccagagataaaaacctgtgtt
gatgcctgtaactttattgccaaaagcacaaaagaactgaatgattttggatctgagaat
gaaaactggattctgattggaaaggttatcgacaaggcttgtttctggattgcacttctc
ctctttagcattggcactgtgacaatcttcctcacagggcacttcaaccaagcaccagaa
ttcccgtttcctggagatccgaggaaatacaaaccagattaa
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