Rhincodon typus (whale shark): 109914116
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Entry
109914116 CDS
T06055
Symbol
si:ch211-278j3.3
Name
(RefSeq) E3 ubiquitin-protein ligase RNF19A isoform X1
KO
K11972
E3 ubiquitin-protein ligase RNF19A [EC:
2.3.2.31
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109914116 (si:ch211-278j3.3)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
109914116 (si:ch211-278j3.3)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
109914116 (si:ch211-278j3.3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
zf-C3HC4
zf-RING_5
zf-RING_2
DUF3504
Motif
Other DBs
NCBI-GeneID:
109914116
NCBI-ProteinID:
XP_048452835
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Position
5:complement(39977557..40024997)
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AA seq
551 aa
AA seq
DB search
MRRPNKHRQLQFFSLFSRKPKSKSKLEMSTVAVEGIHAKTENEDEKKMSSTNRTTHSSSN
EQLLGTLECPLCLLSQPRSQFPEITSCHHRSCLACLQQYLKIEITESRVNVACPECSELF
HPSDIRMILNNGSLMEKYEEFMLRRYLASDPDARWCPAPDCSYGVIASGCATCPKLTCER
SGCATEFCYHCKQLWHPDQTCSEARKQRDVFVAGIEKHSTSLIHSEESDNAEEIKPCPRC
GAFILKMNDGSCNRMTCAVCGCQFCWLCMKEITDLHYLSPSGCTFWGKKPWSRKKKILWQ
VGMLVGAPIGITLIAGIAVPVMMVGLPIYVGRKIYSRCESNKISKHRRRLAVAGGVVLSI
IVSPVLAAITVGIGVPVMLAYVYGVVPVSLCRSDWCGVTTGNGKGVKIEIDEDAASVNEP
RPRLHNHSISGSSVQEVTSGLSASGSNLDRVGVKLENDQSASTVALAGSMLSAEQDSSNR
EGKNIEVHVDIETEPGGAKDRSSSSYLSVHSLSMESPNCSRELLCGTSPNTERISIQTFY
RLSNPQDSQKF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaccgaataaacatcgacagctccaattctttagtctgttcagcaggaaacct
aaatcaaaatcaaagctggagatgtccacagttgctgttgagggaatacatgcaaaaact
gaaaatgaagatgaaaagaaaatgtcctccactaacaggacaacgcactcatccagtaat
gaacagttgttgggtactctagagtgcccactctgccttcttagccaacctcgatcccag
ttcccagagatcacttcttgtcaccatcgttcttgcctggcttgcttacagcaatatttg
aagattgaaattacagagagtcgggtcaatgttgcctgtccagaatgttctgagttattt
catccatcagacatccgtatgattctcaacaatggcagtttgatggaaaagtacgaggag
ttcatgctgaggagataccttgcatcagacccagatgcccgatggtgccctgcacctgac
tgtagttatggagtaatcgccagtggctgtgcaacttgcccaaagctgacatgtgagcgg
tcagggtgtgcgacagaattctgttaccactgcaaacaactttggcacccagatcaaact
tgcagtgaggctcgaaagcagagagatgtgtttgttgctggaatagaaaaacactctacc
tctcttattcacagtgaagaatcagataatgctgaagagatcaagccatgtccacgctgt
ggtgcttttattctgaagatgaatgatggaagctgtaataggatgacatgtgctgtgtgt
ggttgccagttctgctggctgtgcatgaaggagattacagatctgcactacctcagtccc
tctggctgcactttttggggtaagaaaccgtggagccggaagaagaagattctctggcaa
gtgggtatgttggttggtgctccaattggaattaccttgattgcgggcattgctgttcca
gttatgatggttgggcttcccatctacgtaggccgaaagatatacagccgttgtgaaagt
aacaaaatatcaaaacatagacggaggcttgctgtggctggaggagtggttctatcaatt
attgtctctcctgtgttagctgcaataacagtcggtattggggtgcctgtgatgcttgcc
tatgtgtacggggttgtcccagtgtcgctatgtcgcagcgattggtgtggagttacaact
ggaaacggaaaaggagtgaagattgaaatagatgaagatgctgcctctgttaatgagcca
cggcctagactacataaccacagtatcagcgggagcagtgtgcaagaggtgaccagtggc
ctgagtgcaagtggaagcaacctagacagagtgggtgtcaaattagaaaatgatcaatca
gcaagcactgttgcattagcaggaagtatgctgagtgcagaacaggattcttcaaacagg
gaaggaaagaacatagaggtccacgtggatattgaaacagaacctggtggtgcaaaagac
cgcagtagcagtagctacttgtcagttcacagtttgtctatggagtcaccaaactgctca
agagaactattgtgtggcactagtccaaataccgaacggatttccattcagactttttac
agactttccaacccacaggattcccagaaattttga
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