Rhincodon typus (whale shark): 109914226
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Entry
109914226 CDS
T06055
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like isoform X4
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109914226
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109914226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109914226
04090 CD molecules [BR:
rtp04090
]
109914226
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Tumor necrosis fators
109914226
CD molecules [BR:
rtp04090
]
Proteins
109914226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Col_cuticle_N
FapA
C1q
DUF1664
Spectrin_Anc-1
CCDC28
Motif
Other DBs
NCBI-GeneID:
109914226
NCBI-ProteinID:
XP_020369397
LinkDB
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Position
14:complement(18360881..18386852)
Genome browser
AA seq
276 aa
AA seq
DB search
MQAKCWIKLPDTRTRSTSRGLIGTIVVLFFAVLCCLSLLVMLLQQIRDLRSELAKVHKQL
NVFSKRARVNLEDDSVEHEQEMEDLSENLKNSYNAKSQIKEQLTGLNEKSYDLRSISRKR
RDVRSCERQISFLQLIPNARKSIILQEDSTFIPWIVASKKGEALKAISNKIVVRESGYYT
VYSQVLYYDNCMAMGHVVQKRKANVVGNEQSVLTLFRCIQNMPNSSASNTCFTAGIVNLD
QGDELELLLPSRPNANISMEKDSTFFGAIQLLRSNV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaaatgttggattaaattaccagacacaaggaccagatctacctcgagaggt
ctgattggaactattgttgttctctttttcgctgtgttatgctgcttgtcacttctggtc
atgttactgcagcaaataagagatctacggagtgaactggcaaaagtccacaaacaactt
aatgtttttagcaagagggcaagggtaaatcttgaggatgattcagtggaacatgaacaa
gaaatggaagatctgtccgaaaatttgaaaaatagctataatgccaaatcccaaataaaa
gagcagttaactggactgaatgagaagagctatgatctcaggagcatttcaaggaaaagg
agggatgtaagatcctgtgaaagacagatatcattcctccagctgattcctaatgctagg
aaaagcataattttgcaagaagattcaacctttattccttggattgtggcttcaaagaag
ggtgaggcactgaaggcaatttccaacaaaatagttgtgagagagagtggttattacact
gtgtacagtcaggttctttactatgataactgcatggccatgggtcatgtagtccagaag
aggaaggctaatgttgttgggaatgaacaatctgtgctgacgctatttcgctgcattcaa
aacatgccaaacagctcagccagtaatacctgtttcaccgctggaattgtgaatcttgac
caaggggatgagctggaactcctgttaccatcccgacccaatgccaacatctccatggag
aaagattcaacattttttggtgccattcaattattacgaagcaatgtctga
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