Rhincodon typus (whale shark): 109914257
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Entry
109914257 CDS
T06055
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109914257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109914257
Transporters [BR:
rtp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109914257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Zeta_toxin
Rad17
AAA
MeaB
AAA_28
G-alpha
AAA_24
AAA_29
DUF2207_C
AAA_7
Motif
Other DBs
NCBI-GeneID:
109914257
NCBI-ProteinID:
XP_020369439
LinkDB
All DBs
Position
2:complement(81334359..81411349)
Genome browser
AA seq
1274 aa
AA seq
DB search
MEPDSANLGNGEFNKVKYKENALENPKENHRKNKNKDEKQVEKVPAVNPLQMFRFADGLD
IFLMVVGIIAAVAHGICLPLLSVVFGDMTNGFICQAANSTLNLTDCDDMPFEEQMAKFSY
YYVAIGAGALLCAYIQVSFWVLTSARQTRRLRKLFFHTLLRREIGWFDVNPVGQLNTRLT
ADINKINEGIGDKIGLLFQYIATFAGGVIVGFARGWKLTLVILAASPLLALSAVLWSKLT
VSFTSLEMTAYAKAGAVAEEVLGAIRTVMAFGGQQKEIERYHSNLGEAKKIGIKKAITAN
LSVGFAYFIIFGSYGIGFWYGTTLVLENSEYSIGTVLTIFFCVTFGTFSIGQTAPYIEAF
SNARGAAYEIYKILDEKSAIDGFSEEGYRPDQIKGIVEFKNVHFNYPSRPDVKVLRGLNL
KIKSGQTVALVGSSGCGKSTTIQLLQRYYDLQEGSITVDGHDIRSLNIRHFRKFIGVVSQ
EPVLFATTIAENIRFGREDVTDAEIEMATKEANAYDFIMKLPDKFDTLVGQRGTQLSGGQ
KQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKASKGRTTILIAHRLSTIRTA
DMIASFQNGVLVEQGTHAELMQQNGVFHSLVLAQSFKSTEEENRKTENGEEQDESENLLH
KRTLSNKSSTRSGNEIETEVEKNEAKEEKLQSVSFLKLFKLNKSEWPYIFLGVIGASING
ATHPAFCIIFAKIISIFTETDTAVIRQQADLYSILFFVIGIISFVTYFLQGFMFGKAGEI
LTQKLRYMAFKSMLRQEIAWFDDKKNSTGALITRLATEASQVQTTVGSRLGLIAQNIASM
GSAVIISFIFGWQMSLLVLAMVPILAVAGVVEMKSLTGYTSRDKKDLEAAGKVATEAVEN
IHTVVSLTAEPTFEKMYDENLELPHRNAKKKSQVYGFAFALSQAIQYFSYAASFRFGAFL
ISINAMDVEGVFLVFNAIVYGAVAIGQSSSFAPDYAKAKVAAMNLFALFERVPAIDSDST
DGQKLENFNGDLKFSKVYFRYQSRPNVPVLKRLSFKVGKAQTLALVGSSGCGKSTSVQLI
ERFYDPLKGEVFLDGTDIKNINIQWLRSQIGIVSQEPVLFNCSIAENIAYGDNSRTVSQE
EIEKAAKAANAHSFIDQLPDKYNTRVGEKGAQLSGGQKQRIAIARALVRQPKILLLDEAT
SALDTESEKIVQEALDKAREGRTCVIIAHRLTTVQNADVIAVIDNGQVIEQGTHEQLLAR
HGAYYNLVNAQVIQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagacagtgcaaatttgggaaatggtgaatttaacaaagtgaagtacaaggaa
aatgcactggaaaatcctaaggagaatcatagaaaaaacaaaaataaagatgaaaaacaa
gttgaaaaagtaccagcagttaacccccttcagatgtttcgttttgcagatggtctagat
attttcctgatggtagttggaattatagctgcagtggctcatggaatttgccttccgctg
ttgtcagttgtttttggagatatgacaaatgggtttatatgccaagctgccaattcaacc
ttaaatttgacagactgtgatgacatgccctttgaagaacaaatggctaagttttcctat
tactatgttgcaattggagcaggagcactgctatgtgcttacatccaagtttctttttgg
gttctgacttcagcaagacagacgagaagacttcgaaagctattttttcacactttactg
agaagagagattggatggtttgatgttaacccagttggacaactcaatacacgtctaaca
gctgacatcaacaaaatcaacgagggaattggggataagattggacttttgttccagtat
atcgcaacttttgccggaggcgtaatagttggttttgcaaggggatggaagctaactctg
gtaattctggctgccagccctctccttgcattatcagctgttctgtggtctaagctcaca
gtgtcgttcaccagcttagagatgacagcttatgcaaaagctggagccgttgcagaagag
gtgttgggggcaatccgaacggtgatggcgtttggaggtcaacagaaagagattgaaagg
taccatagcaatttaggtgaagcaaagaaaattggtataaagaaggctattactgccaat
ctgtctgttggatttgcctactttataatatttggatcttatggaattggattttggtat
ggaactactttggtacttgagaactcagagtattccattggaacagttctcactattttt
ttctgtgttacctttggaacattctcgattggtcaaacagcaccctatattgaagcattc
tctaatgctagaggagcggcatatgaaatctataaaatactagatgagaaatctgccata
gatggtttctcagaagaaggatataggcctgatcaaattaaaggaatagtggaatttaag
aatgtgcattttaattatccatcaagaccagatgtaaaggttttaagaggcctgaatttg
aagattaagagcggacagacggtagctctggtgggaagcagcggctgtggaaaaagtaca
accattcagttgctgcagagatactacgatctccaggaaggatcgattacagttgatggc
catgatatacggtcactaaatatcaggcattttcgaaagttcattggcgtggtcagtcaa
gagcctgtactttttgctacaaccattgctgaaaacatacgatttggacgtgaagatgtt
acagatgcagaaattgagatggctacaaaagaagcaaacgcttatgatttcatcatgaaa
cttcctgataaattcgacactcttgttgggcagagaggtacacaactgagtggagggcag
aaacaaagaattgcaattgcccgggctctggtgcgtaatcccaagatccttttgttagat
gaagctacttcagccctggacacagagagtgaagctgtggttcaagcagcattggataag
gcaagtaaaggtcgtactacgatcttgattgctcatcgtctgtcgacaatcaggactgca
gacatgatagcaagctttcagaatggtgttttagtggaacaggggacacatgcagaattg
atgcagcaaaatggagttttccattcacttgtactggcacagtcttttaaaagcacagag
gaagaaaacaggaaaacagaaaatggcgaagagcaggatgaatctgaaaatcttctccac
aagcgcacactgtctaataaatcaagtacgagaagtggtaatgagattgaaactgaagtg
gaaaaaaatgaggcaaaggaagaaaaactccaaagtgtttcatttctgaaacttttcaaa
ttgaacaaatcagagtggccttacatatttctgggagtcataggtgcgagtatcaatgga
gcaactcatcctgccttttgcattatatttgcaaaaattattagtatctttactgaaacc
gatacagcagtgatcaggcaacaagcagatctttattctattttattctttgttatcggt
ataatttcctttgttacatatttcttacaaggttttatgtttggaaaggctggggaaatc
ctcactcagaaactgagatatatggccttcaagtcaatgttacgtcaggagattgcttgg
tttgatgataagaaaaacagcactggtgccctaatcacaagactggcaacagaggcatcg
caagtccaaacaactgtaggttcaagattaggactaatagcacaaaacattgcaagcatg
ggatctgctgttattatatcattcatatttggatggcagatgagcttgttggtcctagca
atggtgcccatccttgctgtggccggagtggttgaaatgaaatctctaacaggatacaca
agtcgtgataaaaaagaccttgaagcagctggaaaggtagcaacagaagctgtggaaaat
atccatactgttgtttctttgactgcggaaccaacgtttgaaaagatgtacgatgaaaat
ttggagttgccacaccgaaatgctaaaaagaaatcccaggtctatggttttgcctttgca
ctgagccaggctatccaatactttagctacgctgctagtttccgatttggtgcattcctg
atatcaataaatgcaatggatgtagaaggtgttttccttgtttttaatgccattgtgtat
ggtgctgtagcaattggacagagcagttcttttgctcctgattatgcaaaggcaaaagtt
gctgcgatgaatctctttgcactttttgagcgtgtgccagctatagacagcgacagcact
gatggacagaagctggaaaacttcaatggtgacttgaaattctccaaagtttacttcaga
tatcagagtcgtccaaatgtaccagtgctcaaaagactgtcattcaaggttggaaaagca
cagactttggcactagttggcagcagtggttgtgggaaaagtacatctgtgcagcttata
gaaaggttctatgacccactgaaaggagaagtgtttctggatggaactgatatcaaaaac
atcaacattcaatggcttcgatcacaaataggaattgtatcccaggaacctgtgctcttc
aattgtagcattgctgagaatattgcctatggtgacaacagcaggaccgtatcacaggag
gagattgagaaggcagcaaaggcagcaaatgctcattcctttattgaccaactccctgat
aaatacaacactagagttggggagaaaggagctcagctttccggtgggcaaaaacaacga
atagctattgcacgagctctcgtacggcagccaaaaattctgctcttagatgaggcgaca
tctgcacttgatacagagagtgaaaagattgttcaggaggctctcgacaaagcaagggaa
ggacggacctgtgtgatcattgctcaccgtttgacgacagttcagaatgctgatgtgatt
gctgttattgacaatggacaagtaatagaacagggcacacatgaacagctgctagctaga
cacggggcttactataatctagtaaatgcccaggtcattcaataa
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integrated database retrieval system
