Rhincodon typus (whale shark): 109914264
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Entry
109914264 CDS
T06055
Name
(RefSeq) contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109914264
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
109914264
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
Contactins
109914264
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
Others
109914264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
109914264
NCBI-ProteinID:
XP_048462598
LinkDB
All DBs
Position
16:complement(43689220..45067531)
Genome browser
AA seq
1027 aa
AA seq
DB search
MMLLWKLLLLQSFIGCLAENGKPHGPVFLHEPNDIVFPVDSEEKKATLNCEATGNPTPHY
RWQRNGTDIDISLSYRYSLVGGNLVITNPDRTQDYGTYQCFATNLFGTIMSKAAKFEFAY
LESFKGKSRNNVSVREGQGVVLLCGPPAHSTELKYTWIFNQFPTFVEQDNRRFVSQKTGN
LYISKVEVSDVGSYICEIENTVTNKRVLSPPTPLVLRSDGVMGEYEPKVEVRFPETVFAA
KGSTVKLECFALGNPVPTISWRRIGSSFSDKVKVNKTYGVLEITNFQQKDSGTYECTAEN
SRGKNTARGQLVFYARPNWIRNLTDAYVPIGESLQWICKASGEPKPSHRWLKNGEPLLTE
ERIQVEKGTLFIRAVNLSDSGMYQCVAENKHGVIYVSAELRVMASAPDFSMSSLKKLIPV
RIGGEVIIECKPKASPRATLSWMKGNEVLRENERITLEDGSLRIVNVTKKDDGRYTCIAW
NHFGSANSTGTIMVKDPTRITTPPSDVDVTVGESTILPCQVSHDPSLSVEFSWSFNGQLI
DFRRDRDHFENVGGGYSGDLMIRNIQLKHAGRFVCMVQTTVDSASAGAYLIVRVPPGPPG
GVIVEEITDTTAQLSWSPGIDNHSPISTYTIQARTPFSVGWQAVKTVPEVIDGDAVTATV
IDLSPWVEYEFRVVASNSIGIGEPSLPSAKSRTEEALPDMGPANVSGGGGSRSELVITWE
PVPEELQNGEGFGYVVAFRLLGTTSWMKAAVTSADASRYVFRNESVPPFCPYEVKVGVYN
NKGEGPYSPVIIIYSAEEEPTAAPFNVSARSLSASEVQVFWEAVPWETNKGKVRGYEIWY
WADDENEETADKLRSNGNITSAKVTGLKGSTLYYLMVKAYSSAGTGPASSPVNVTTRKPP
PSQAPGKIWWESASSRVVLNWDHVKAMENESEVTGYKVLYRNNRQSSTKVIETNNTSVEL
LLPDDADYIIEVKTFSDGGDGISSAQIRIPRMSYPDSGRSGTSASNACTLSAFSTIVLSL
SARSALW
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctgttactacaatcattcattggctgccttgcagagaat
ggcaaaccacatgggccagtttttctccatgagcctaatgacattgtgtttcctgtggat
tctgaagaaaagaaagcaacgctgaactgtgaagcaacagggaatccaacaccacattac
agatggcaaaggaacggcacagacattgacataagcctcagttaccgctatagtttggtg
ggtggcaatctcgtcatcactaacccagacaggacccaggactatggaacctaccagtgc
ttcgcaacaaatttgtttggcacgatcatgagcaaagcagccaagtttgaatttgcatat
cttgaaagcttcaaaggaaaatcaagaaataacgtgtctgtccgtgagggacaaggagtt
gtgttgctttgtggccctccagcacattctacagaactaaaatacacttggatatttaat
cagtttccaaccttcgtggaacaagataatcgtcgctttgtgtctcaaaaaactggaaac
ttatacatatcaaaagtggaggtatcagatgttggttcctacatctgtgagatcgagaat
acagttactaataagagagttctgagcccacctacccctctggtactgcgtagtgatggg
gtgatgggtgaatatgagccaaaggttgaagttcgtttcccagaaacagtctttgcagct
aaaggatcaacagtgaagctggaatgctttgcactgggaaatccggtcccgactattagc
tggagaagaattggcagctccttctctgacaaagtcaaagtgaacaaaacatacggtgtt
cttgaaatcacaaactttcagcagaaggattccggtacatatgaatgtactgctgaaaat
tcaagaggaaagaacactgcgagaggacaattggtgttttatgcacggcctaactggatt
cgaaacttaactgatgcttatgtgcctattggagaaagtctacaatggatttgtaaggca
agtggagagccaaaaccttctcatagatggctgaagaatggtgaaccccttctaacagag
gaaagaattcaagttgaaaagggaacactttttattcgtgctgttaacttgtcagattct
ggcatgtatcagtgcgtggctgaaaacaaacatggagtaatttatgtcagtgctgagctt
cgggttatggcatcagctcctgatttttcaatgagctccttgaagaaattaatacctgtc
cgcataggtggtgaggtcatcattgaatgtaaaccaaaagcttccccgagagcaacattg
tcgtggatgaaaggaaatgaggttctgcgggaaaatgaaaggattactctggaagatggg
agtctacgaatagttaatgtaacgaagaaggatgatggacgctacacttgtattgcctgg
aaccattttggatcagcgaacagcacaggaacaataatggtgaaagacccaacaagaatt
accacaccaccatcagacgtggatgtcactgtgggtgaaagtacaatcttaccgtgccaa
gtctcccatgatccttcattgagtgttgaattctcgtggtcatttaatggtcaacttata
gacttcagaagagatagagaccattttgaaaatgtcggagggggatactctggtgatttg
atgatcagaaatattcagcttaaacatgccggtagatttgtttgcatggtccagaccact
gtcgacagtgcatcagctggagcttatctgattgtgagagttccaccaggtccaccaggg
ggtgtgatagtggaggagattacagataccacagctcagctgtcctggagtcctggaatt
gacaatcacagcccaatttccacatacacgatacaggcacggactcccttttcagtgggt
tggcaagctgttaaaacagttcctgaggtcattgatggcgatgctgtaacagcgacagtg
atcgatttaagcccttgggtagaatatgaattcagagttgtcgctagtaacagtattggc
attggggaaccgagcttaccatctgcaaaatcaagaacagaagaagcccttcctgacatg
ggtccagcgaatgttagcggcggaggtggcagtcgttctgaactggtaataacttgggag
cctgtgcctgaagagttgcaaaacggtgaaggctttggatatgttgttgctttccgactg
ttgggaacaacaagctggatgaaggcagcagtaacctcagcggatgcatcaagatacgtg
tttaggaatgaaagtgtgccacctttctgtccctatgaagtaaaagtcggagtctacaat
aacaaaggcgaaggcccttacagcccagtaatcattatatattcagctgaagaggaaccc
actgcagcaccattcaatgtctcagccagaagtctgtcagcttcagaagtgcaagttttc
tgggaagctgtgccttgggagaccaacaaaggaaaagtgcgaggttatgagatttggtat
tgggcagatgatgagaatgaagagacagcagataaactgagatcaaatggaaacattact
tcagcaaaggtcacaggattgaagggcagcacactgtattacctgatggttaaagcatac
agcagtgctggaactggacctgctagctctccagttaatgtcacaactcggaaaccacca
ccaagtcaagcacctggaaaaatatggtgggaatcagccagctccagagttgttttaaac
tgggatcatgtcaaagctatggaaaatgaatcagaagtgacaggatataaagttttgtac
agaaataacaggcaaagcagtacaaaggtgatagaaaccaacaacacatcagtggagctt
ctactccctgatgatgctgattatatcattgaagtgaagacattcagtgacggtggtgat
ggaatcagcagtgctcaaatcagaatcccacgaatgtcatatccagatagtggaagatct
ggaacttcagcatcaaatgcctgcacactgtcagcctttagcactatagtgctgtccctg
tcagctagatcagcattatggtga
DBGET
integrated database retrieval system
