Rhincodon typus (whale shark): 109914284
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Entry
109914284 CDS
T06055
Name
(RefSeq) transcription factor COE2
KO
K09103
early B-cell factor
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109914284
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109914284
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
RsmI_C
Motif
Other DBs
NCBI-GeneID:
109914284
NCBI-ProteinID:
XP_048474585
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Position
40:complement(7846249..8093405)
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AA seq
580 aa
AA seq
DB search
MFGIQDHIPRGADIKDKSTGSGMDAVRSWVRTVGVVAANVAAQSGVALARAHFEKQPPSN
LRKSNFFHFVLALYDRQGQPVEIERTTFTDFVEKDLEPGNDKTNNGTHYKLQLLYSNGMR
TEQDLYVRLIDSVTKQPIVYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSTTINVDGHVLAVSDNMFVHNNSKHG
RRARRLDPTEATPCIKAISPSEGWTTGGAMVIIIGDNFFDGLQVLFGTMLVWSELITPHA
IRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKVIPRHPGD
PERLAKEMLLKRAADLVEALYGGPPNNQEIILKRAADIAEALYSVPRTPSQLPTLSNTPS
HSSMMRMNSYGSQLGVSISESTQGNSQGYIHNSSSISPRGYAPTHSPQQSNYNTVGGNIN
GYSNVPMSNLGVPSSPGFLNSSPVSSPYGIMPSSPTVASAVPLSSSTSAILPFSSSVFPA
VKQKSAFAPVIRPQDSPSPACSNGNGNGFRAMTGLVVPPM
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaccatataccgagaggggctgatatcaaggacaaatcgactggg
agtggaatggacgctgttcgatcttgggtccggaccgtaggggtggtggccgccaatgtc
gcggcacagagcggcgtggctctggccagagcgcacttcgaaaaacagcctccgtccaat
ttacggaagtccaattttttccacttcgttctggcactttatgacagacagggccagcca
gtagagattgagcgaaccactttcacagacttcgtggagaaagacttggaaccgggaaac
gacaaaactaacaacgggactcattacaagctgcagctactctacagcaatggtatgcgg
acggaacaagacctgtacgtgcgactcatcgattcagtgaccaagcagccaattgtctac
gagggtcaaaacaaaaacccagaaatgtgccgggtacttctcacacatgaagtaatgtgc
agccgctgctgtgaaaaaaagagctgtggcaacagaaatgaaactccttcagatcccgtc
atcattgacagattcttcctaaagttcttcctcaagtgcaatcagaattgtttgaaaaca
gccgggaacccacgagacatgcgccgattccaggttgttttatcaacaacaataaatgtt
gatggtcatgtgctggctgtttccgataacatgtttgtgcacaacaactccaagcatgga
cgcagagcccgtcgccttgaccccacagaagctacaccatgcatcaaagccatcagccct
agtgaaggttggaccactgggggtgccatggtcatcattattggggataattttttcgat
ggattgcaagttctgtttggcaccatgcttgtttggagtgagctcattactccccatgcc
attagagtacagactcctcctcgacacattccaggagtggtggaggtcacactttcgtac
aagtcaaaacaattctgcaaaggtgcacctggaagattcatttatacagcactgaatgag
cccacaatagactacggtttccagagactgcagaaggtcattcctcggcacccaggtgat
ccagaaagactagcaaaggagatgttactgaaaagagcagcagatcttgttgaggcatta
tatggaggaccaccaaataatcaggaaataattctgaagcgagcagccgatattgcagaa
gctctgtacagtgtgcctaggacccccagccagcttccgacactttctaatactcccagc
cacagcagcatgatgagaatgaactcctatggtagtcaactgggagtgagcatctcagag
tccacacagggcaacagccaaggatatatccacaacagcagcagcatctctccacgtgga
tatgcacccacccattcaccacaacagtcaaactacaacacagtgggtggcaatatcaat
ggatatagcaatgtgccaatgtcaaaccttggagtacccagttctcctggattcctaaac
agctctcctgtcagctcaccctatggcattatgccttccagtccgactgtggcctctgct
gttcctctgtcctccagcacatctgccattcttcccttctcatcttctgtcttccccgca
gtgaaacagaagagcgcctttgcaccggtgatccgaccccaagactccccctccccggcc
tgctccaatgggaatggaaatggattccgagccatgactgggctcgtagttcctccgatg
tga
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